LYSM3_CHICK
ID LYSM3_CHICK Reviewed; 300 AA.
AC Q5ZKK0;
DT 05-SEP-2006, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=LysM and putative peptidoglycan-binding domain-containing protein 3;
GN Name=LYSMD3; ORFNames=RCJMB04_10e22;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: Essential for Golgi structural integrity.
CC {ECO:0000250|UniProtKB:Q7Z3D4}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250|UniProtKB:Q7Z3D4};
CC Single-pass membrane protein {ECO:0000255}. Golgi apparatus
CC {ECO:0000250|UniProtKB:Q7Z3D4}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AJ720084; CAG31743.1; -; mRNA.
DR RefSeq; NP_001026585.1; NM_001031414.1.
DR AlphaFoldDB; Q5ZKK0; -.
DR STRING; 9031.ENSGALP00000042525; -.
DR PaxDb; Q5ZKK0; -.
DR GeneID; 427106; -.
DR KEGG; gga:427106; -.
DR CTD; 116068; -.
DR VEuPathDB; HostDB:geneid_427106; -.
DR eggNOG; KOG2850; Eukaryota.
DR InParanoid; Q5ZKK0; -.
DR OrthoDB; 1180847at2759; -.
DR PhylomeDB; Q5ZKK0; -.
DR PRO; PR:Q5ZKK0; -.
DR Proteomes; UP000000539; Unplaced.
DR GO; GO:0005794; C:Golgi apparatus; ISS:UniProtKB.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; ISS:UniProtKB.
DR GO; GO:0007030; P:Golgi organization; ISS:UniProtKB.
DR CDD; cd00118; LysM; 1.
DR Gene3D; 3.10.350.10; -; 1.
DR InterPro; IPR045030; LYSM1-4.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR PANTHER; PTHR20932; PTHR20932; 1.
DR Pfam; PF01476; LysM; 1.
DR SMART; SM00257; LysM; 1.
DR SUPFAM; SSF54106; SSF54106; 1.
DR PROSITE; PS51782; LYSM; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Glycoprotein; Golgi apparatus; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..300
FT /note="LysM and putative peptidoglycan-binding domain-
FT containing protein 3"
FT /id="PRO_0000248011"
FT TOPO_DOM 1..212
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 213..233
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 234..300
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 64..108
FT /note="LysM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01118"
FT REGION 1..52
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 36..52
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 149
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 170
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 300 AA; 33416 MW; 2872D95E23B35CED CRC64;
MAGRGTGCSL QLPAGTQPPG GGHLYPGESE GPEEESEVFE LRPRGREKVR RSTSRDRLDG
IILLTKDIQE GDTLNAIALQ YCCSVADIKR VNNLINDQDF FALRSIKIPV KKFSVLTETH
VSPKGRTVLR PAHYSPEVQE ASPDKFTANE TAGNFLKEVD RDIEEIVKCN DTKRENLNEV
VSALAAQQVC FETDGRSKKC KDPYYGADWG IGWWTAVVIM LIIGIVTPVF YLLYYEVLVK
ADVSHHSTME SAHSFVTAAS HQKQIEHGRS PANSINVDSQ GDIRPYNRKP QANVIHRHIT
