LYSM4_XENLA
ID LYSM4_XENLA Reviewed; 289 AA.
AC Q6DCC7;
DT 05-SEP-2006, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 66.
DE RecName: Full=LysM and putative peptidoglycan-binding domain-containing protein 4;
GN Name=lysmd4;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Oocyte;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
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DR EMBL; BC078121; AAH78121.1; -; mRNA.
DR RefSeq; NP_001087174.1; NM_001093705.1.
DR RefSeq; XP_018106538.1; XM_018251049.1.
DR AlphaFoldDB; Q6DCC7; -.
DR SMR; Q6DCC7; -.
DR DNASU; 447063; -.
DR GeneID; 447063; -.
DR KEGG; xla:447063; -.
DR CTD; 447063; -.
DR Xenbase; XB-GENE-6077965; lysmd4.L.
DR OMA; MWRGENG; -.
DR OrthoDB; 1180847at2759; -.
DR Proteomes; UP000186698; Chromosome 3L.
DR Bgee; 447063; Expressed in blastula and 19 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR CDD; cd00118; LysM; 1.
DR Gene3D; 3.10.350.10; -; 1.
DR InterPro; IPR045030; LYSM1-4.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR PANTHER; PTHR20932; PTHR20932; 1.
DR Pfam; PF01476; LysM; 1.
DR SMART; SM00257; LysM; 1.
DR PROSITE; PS51782; LYSM; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..289
FT /note="LysM and putative peptidoglycan-binding domain-
FT containing protein 4"
FT /id="PRO_0000248017"
FT TOPO_DOM 1..208
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 209..229
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 230..289
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 71..115
FT /note="LysM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01118"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 252..272
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 9..23
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 30
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 59
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 134
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 178
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 289 AA; 32054 MW; 922D78FDD71FF68C CRC64;
MRLREGPTHS FQPPSSVHSS LGSHVYTFSN GTAEADSSSE EEFDVMELRA RGGEQQRINA
SREKVGNVIL LERAITEDDN LNKLALQYGC KVSDIKRVNN LITDQDIYAL KTIKIPVKVH
GLLTERRDEL TAFNASAPPE PEKELSLPSM ESRDFTVYFK AIDQNIEEAA AQTHDLFNES
FALDSPSLPP TRILGQKQPA SGADWGIRWW NAVFIMLLVG IVLPVFYIVY FKTQGDSEGT
FSIEGRTNVS TSLSPHTNTG HSMEQMTQRT SGFSPGLLQD THKLLNPGG