LYTB_STRR6
ID LYTB_STRR6 Reviewed; 702 AA.
AC P59206; Q9Z4P7;
DT 10-JAN-2003, integrated into UniProtKB/Swiss-Prot.
DT 10-JAN-2003, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Putative endo-beta-N-acetylglucosaminidase;
DE EC=3.2.1.96;
DE AltName: Full=Murein hydrolase;
DE Flags: Precursor;
GN Name=lytB; OrderedLocusNames=spr0867;
OS Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae;
OC Streptococcus.
OX NCBI_TaxID=171101;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 24-30.
RX PubMed=10096093; DOI=10.1046/j.1365-2958.1999.01238.x;
RA Garcia P., Gonzalez M.P., Garcia E., Lopez R., Garcia J.L.;
RT "LytB, a novel pneumococcal murein hydrolase essential for cell
RT separation.";
RL Mol. Microbiol. 31:1275-1281(1999).
RN [2]
RP SEQUENCE REVISION.
RA Garcia J.;
RL Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-255 / R6;
RX PubMed=11544234; DOI=10.1128/jb.183.19.5709-5717.2001;
RA Hoskins J., Alborn W.E. Jr., Arnold J., Blaszczak L.C., Burgett S.,
RA DeHoff B.S., Estrem S.T., Fritz L., Fu D.-J., Fuller W., Geringer C.,
RA Gilmour R., Glass J.S., Khoja H., Kraft A.R., Lagace R.E., LeBlanc D.J.,
RA Lee L.N., Lefkowitz E.J., Lu J., Matsushima P., McAhren S.M., McHenney M.,
RA McLeaster K., Mundy C.W., Nicas T.I., Norris F.H., O'Gara M., Peery R.B.,
RA Robertson G.T., Rockey P., Sun P.-M., Winkler M.E., Yang Y.,
RA Young-Bellido M., Zhao G., Zook C.A., Baltz R.H., Jaskunas S.R.,
RA Rosteck P.R. Jr., Skatrud P.L., Glass J.I.;
RT "Genome of the bacterium Streptococcus pneumoniae strain R6.";
RL J. Bacteriol. 183:5709-5717(2001).
CC -!- FUNCTION: Plays an important role in cell wall degradation and cell
CC separation.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endohydrolysis of the N,N'-diacetylchitobiosyl unit in high-
CC mannose glycopeptides and glycoproteins containing the
CC -[Man(GlcNAc)2]Asn- structure. One N-acetyl-D-glucosamine residue
CC remains attached to the protein, the rest of the oligosaccharide is
CC released intact.; EC=3.2.1.96;
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 73 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAK99671.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AJ010312; CAA09078.2; -; Genomic_DNA.
DR EMBL; AE007317; AAK99671.1; ALT_INIT; Genomic_DNA.
DR PIR; C97980; C97980.
DR RefSeq; NP_358461.1; NC_003098.1.
DR RefSeq; WP_000757725.1; NC_003098.1.
DR AlphaFoldDB; P59206; -.
DR SMR; P59206; -.
DR STRING; 171101.spr0867; -.
DR CAZy; GH73; Glycoside Hydrolase Family 73.
DR PRIDE; P59206; -.
DR EnsemblBacteria; AAK99671; AAK99671; spr0867.
DR KEGG; spr:spr0867; -.
DR PATRIC; fig|171101.6.peg.955; -.
DR eggNOG; COG4193; Bacteria.
DR eggNOG; COG5263; Bacteria.
DR HOGENOM; CLU_427450_0_0_9; -.
DR PHI-base; PHI:3153; -.
DR Proteomes; UP000000586; Chromosome.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0004040; F:amidase activity; IEA:InterPro.
DR GO; GO:0033925; F:mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity; IEA:UniProtKB-EC.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR InterPro; IPR018337; Cell_wall/Cho-bd_repeat.
DR InterPro; IPR041074; LytB_WW.
DR InterPro; IPR040742; LytB_WW-like.
DR InterPro; IPR002901; MGlyc_endo_b_GlcNAc-like_dom.
DR Pfam; PF01473; Choline_bind_1; 9.
DR Pfam; PF19085; Choline_bind_2; 2.
DR Pfam; PF01832; Glucosaminidase; 1.
DR Pfam; PF18342; LytB_WW; 1.
DR Pfam; PF17890; WW_like; 1.
DR SMART; SM00047; LYZ2; 1.
DR PROSITE; PS51170; CW; 15.
PE 1: Evidence at protein level;
KW Cell wall biogenesis/degradation; Direct protein sequencing; Hydrolase;
KW Reference proteome; Repeat; Secreted; Signal.
FT SIGNAL 1..23
FT /evidence="ECO:0000269|PubMed:10096093"
FT CHAIN 24..702
FT /note="Putative endo-beta-N-acetylglucosaminidase"
FT /id="PRO_0000012117"
FT REPEAT 42..63
FT /note="Cell wall-binding 1"
FT REPEAT 65..84
FT /note="Cell wall-binding 2"
FT REPEAT 86..105
FT /note="Cell wall-binding 3"
FT REPEAT 124..145
FT /note="Cell wall-binding 4"
FT REPEAT 147..166
FT /note="Cell wall-binding 5"
FT REPEAT 185..206
FT /note="Cell wall-binding 6"
FT REPEAT 208..227
FT /note="Cell wall-binding 7"
FT REPEAT 229..248
FT /note="Cell wall-binding 8"
FT REPEAT 250..271
FT /note="Cell wall-binding 9"
FT REPEAT 273..292
FT /note="Cell wall-binding 10"
FT REPEAT 294..315
FT /note="Cell wall-binding 11"
FT REPEAT 317..336
FT /note="Cell wall-binding 12"
FT REPEAT 338..359
FT /note="Cell wall-binding 13"
FT REPEAT 361..380
FT /note="Cell wall-binding 14"
FT REPEAT 382..403
FT /note="Cell wall-binding 15"
SQ SEQUENCE 702 AA; 81900 MW; 84B6536E75301FE5 CRC64;
MKKVRFIFLA LLFFLASPEG AMASDGTWQG KQYLKEDGSQ AANEWVFDTH YQSWFYIKAD
ANYAENEWLK QGDDYFYLKS GGYMAKSEWV EDKGAFYYLD QDGKMKRNAW VGTSYVGATG
AKVIEDWVYD SQYDAWFYIK ADGQHAEKEW LQIKGKDYYF KSGGYLLTSQ WINQAYVNAS
GAKVQQGWLF DKQYQSWFYI KENGNYADKE WIFENGHYYY LKSGGYMAAN EWIWDKESWF
YLKFDGKIAE KEWVYDSHSQ AWYYFKSGGY MAANEWIWDK ESWFYLKFDG KMAEKEWVYD
SHSQAWYYFK SGGYMTANEW IWDKESWFYL KSDGKIAEKE WVYDSHSQAW YYFKSGGYMT
ANEWIWDKES WFYLKSDGKM AEKEWVYDSH SQAWYYFKSG GYMAKNETVD GYQLGSDGKW
LGGKATNKNA AYYQVVPVTA NVYDSDGEKL SYISQGSVVW LDKDRKSDDK RLAITISGLS
GYMKTEDLQA LDASKDFIPY YESDGHRFYH YVAQNASIPV ASHLSDMEVG KKYYSADGLH
FDGFKLENPF LFKDLTEATN YSAEELDKVF SLLNINNSLL ENKGATFKEA EEHYHINALY
LLAHSALESN WGRSKIAKDK NNFFGITAYD TTPYLSAKTF DDVDKGILGA TKWIKENYID
RGRTFLGNKA SGMNVEYASD PYWGEKIASV MMKINEKLGG KD