L_EMARV
ID L_EMARV Reviewed; 2293 AA.
AC Q6Q305;
DT 13-JUL-2010, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 2.
DT 23-FEB-2022, entry version 66.
DE RecName: Full=RNA-directed RNA polymerase L;
DE Short=Protein L;
DE EC=2.7.7.48;
DE AltName: Full=Large structural protein;
DE AltName: Full=Replicase;
DE AltName: Full=Transcriptase;
GN Name=RdRp;
OS European mountain ash ringspot-associated virus (isolate Sorbus aucuparia)
OS (EMARAV).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC Ellioviricetes; Bunyavirales; Fimoviridae; Emaravirus.
OX NCBI_TaxID=1980426;
OH NCBI_TaxID=483436; Eriophyes pyri (pearleaf blister mite).
OH NCBI_TaxID=36599; Sorbus aucuparia (European mountain ash) (Rowan).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=15449143; DOI=10.1007/s00705-004-0397-5;
RA Benthack W., Mielke N., Buttner C., Muhlbach H.P.;
RT "Double-stranded RNA pattern and partial sequence data indicate plant virus
RT infection associated with the ringspot disease of European mountain ash
RT (Sorbus aucuparia L.).";
RL Arch. Virol. 150:37-52(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=17374780; DOI=10.1099/vir.0.82715-0;
RA Mielke N., Muehlbach H.P.;
RT "A novel, multipartite, negative-strand RNA virus is associated with the
RT ringspot disease of European mountain ash (Sorbus aucuparia L.).";
RL J. Gen. Virol. 88:1337-1346(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RA Mielke N., Muehlbach H.-P.;
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: RNA-dependent RNA polymerase which is responsible for
CC replication and transcription of the viral RNA genome. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.48; Evidence={ECO:0000255|PROSITE-ProRule:PRU00539};
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DR EMBL; AY563040; AAS73287.2; -; mRNA.
DR RefSeq; YP_003104764.1; NC_013105.1.
DR GeneID; 8317725; -.
DR KEGG; vg:8317725; -.
DR Proteomes; UP000006676; Genome.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003968; F:RNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR InterPro; IPR007099; RNA-dir_pol_NSvirus.
DR InterPro; IPR007322; RNA_pol_bunyavir.
DR Pfam; PF04196; Bunya_RdRp; 1.
DR PROSITE; PS50525; RDRP_SSRNA_NEG_SEG; 1.
PE 2: Evidence at transcript level;
KW Nucleotide-binding; Nucleotidyltransferase; Reference proteome;
KW RNA-directed RNA polymerase; Transferase; Viral RNA replication.
FT CHAIN 1..2293
FT /note="RNA-directed RNA polymerase L"
FT /id="PRO_0000395604"
FT DOMAIN 1111..1297
FT /note="RdRp catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00539"
SQ SEQUENCE 2293 AA; 265654 MW; AC3F60877F5E2769 CRC64;
MENIRKLEAQ RRKEYLRAET EIRNNNVFEK DILQKFLHIV GKKQRHYTIS SKKKEVQDIF
NKCSTNPGFT KDVIDLAERI LYAPPNLNQI DFAMTIVSLI EMQRHDDLIH KLNELLVRSG
MKVISFEFKL CDHFPFTNSI LTPDILFEDP YGSRYILEVK VRNKHTDLEH YYMRYKKVVG
VHAKVGVFNL SQSGYMQHGD YKLSEKINLE SDDFDDILLC VELAGKIREK YIQYPQYFLY
TLQSEVTNPD SFLDGFKTRL SDLSMFEEIK SGFGDYWNDI TYHMDNYSLI DNHDEVTEDL
LNSTDDLTQY CNDLYDEFLD HSQSYSRQGK YGKTILRNSG LDNIIDKKNR SKYTITSKLK
PSVYIPITKT IKLDTYGGSR LKFYKDAFIN IKCTGDSYSR SAYNLVDNVF NTSSIDLLMT
KDDKIDPSLY YEVLDPGFIA HLHDDQVKYK KIAKVTNITS DMTILANNSF SIHCHTDQRL
KDNICGYDKK HYDSTQKAKE CLDFSNSSLL LPSLGVHLSA IFKSEHHAGV YWNDLVTLGT
DNLNHMTSDI PEEAQTKFLE HLYNSHIIFK AIISLNTINS HKFRLLQSPD PGTIIILLPN
SDGLKGAPLR YFVVSILQKQ DNDSIEANKL LGIYHSHTES KKYKIMLSKV ISLDITRLKL
LSNSFVKYSL LISYYSQFKK SLKFDTHMLS WMLSQVTTIA SLSITDVYKN FIMAIYSDYS
NIDDLINDKL ECRPRTLGHV FVMKHLFQGI TSAVEQLGKI NKNKLIADVN DEGELISTGF
DPNLRLKLPI SQLSTNNPKE IIHESFILFY LGNKGLHGSP QELLNLYYTP MQFESEYTKM
MTDCGLYCQE LGNNGNLSFS FQAMFLTSKV AYAKLLNNTD EIRRSLVKEM KMDEPIMSIK
QFSSTKSMVS NSVPDMSIKD CNLNKNIDVI QLERYIDTSL ISDPMKYITL MNNSIESINQ
ERLLIYKDKL NKGIVLLPKL ILTTFKGKSF IGLENHYYTK LVSGDYIKQT NTKVFDEFYR
LTDEIQEEKL RGFYKGYITE GDLLVRIFNK DQRTTDDREI YTGNAQVRLC LYPLEMTFKS
ICKKIPEEAI TISGDQKQRK LLEQRLALIK TKRQFNKSGY KTEIYSVSSD ASKWSARDLL
PKFIISIATN PYLTSDEKYF LVYLLVRYYD KKIVLTDSAF SNALRFSRED INGKYEEMTN
NFTQNWFNVR SNWLQGNLNM TSSFVHHCST IMTDTLLSIS AKHNGFEAVM TSMVHSDDST
YDFLIAKNSK TSSYINNEAN MGRFIISLIT YSNKKHCITL NEKKTYISTF YKEFLSTTIV
SNELFFFYMA DLMPISSDTS YKSPLEDLAS YTGYINNSFS HACPIQILKC AITLLNHLTL
STYNMQYTSE KNPRCNIPNS TDLPIQIYPR YKLPLSLAGC IPYYSSDAYN ILDDIIKTLE
KNKVIKNSLL EDVIDDETLD EYITLVNKQK PEYAKYIQAC LLTMDYTQYE RDDEDPYNIV
DYDLSQKSII NVASINKGSR IKKTYTYKKY LENETDIRLT SCVNPMWCIS KPKDEVLIKN
PILANYMNPN FKDSLIFSKS ALDYGRRIIG SNKSMDTLSS HAFEKEKKQG IKTIYKKLDD
KISTVEISKQ SLQRFLECIY SVIKKSLVAL QVYYSKVQVL VKTRPEFTKV IMPRSVYAEE
YGKNSNTSMV ENLLVEQYCE IEQVDSKVEK FISFCKHVLQ RCGDIKIYRD PEDIDDDFRK
YIEFKYTLKD ATMGLIQPHQ HLAEYAFDVY NNKLIFQGLM VRYYIDICET ISNPSYNIPS
YTSPNSIIMT LDSLMKRDEI SSKIYISHIR TNRFDEYWLS RFGMYVYENY FVKYKLGYRI
KIAANEKLMP TMKKVRNLRE PFKFICSLVA NDPSLFIQMT ESPDFQISGW KYSDIIAEMK
STTDFSYNLF LYMMNEINFQ TLMRVMNLNR RVWNHWLMKT DSEPSDPNAS IALYMYQSTV
VKVQTKTIGG GVTFSMLLLR HGMQHRQAFD EISKKIASDY APQLRIANIT PQTSFGRLQF
CVNEYGRTVK PGSYRSSCIC NVNIAALTDL KPDIAYKENT INQIVTIISP TFEGEFVFKL
NTYCDSEYYT CVMLENLDLN RVMILDHLCR GKYLIENPEY FTEISDQITP GACLALFSNN
VNNKLWSNTI DTSKFAKLVH IGNYLKTEHE ASIVTKLCDS LVAICALNGI DHTLSLKPDN
FIKSLRQYKL SYGFHEEFYN NYKKNEREPY TELIMAIAST AGDPFQKVIL AIITIFKAYT
DLFISYKTDE VEF