M10B1_DANRE
ID M10B1_DANRE Reviewed; 1013 AA.
AC Q1LXK4;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 08-APR-2008, sequence version 2.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Putative helicase mov-10-B.1;
DE EC=3.6.4.13;
GN Name=mov10b.1; ORFNames=si:dkeyp-38g6.2;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (NOV-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Probable RNA helicase. Required for RNA-mediated gene
CC silencing by the RNA-induced silencing complex (RISC). Required for
CC both miRNA-mediated translational repression and miRNA-mediated
CC cleavage of complementary mRNAs by RISC (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC -!- SUBCELLULAR LOCATION: Cytoplasm, P-body {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the DNA2/NAM7 helicase family. SDE3 subfamily.
CC {ECO:0000305}.
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DR EMBL; BX323059; CAK11382.2; -; Genomic_DNA.
DR EMBL; BC171375; AAI71375.1; -; mRNA.
DR RefSeq; NP_001037807.2; NM_001044342.2.
DR AlphaFoldDB; Q1LXK4; -.
DR SMR; Q1LXK4; -.
DR STRING; 7955.ENSDARP00000081380; -.
DR PaxDb; Q1LXK4; -.
DR Ensembl; ENSDART00000086946; ENSDARP00000081380; ENSDARG00000061177.
DR GeneID; 556024; -.
DR KEGG; dre:556024; -.
DR CTD; 556024; -.
DR ZFIN; ZDB-GENE-030131-9089; mov10b.1.
DR eggNOG; KOG1804; Eukaryota.
DR GeneTree; ENSGT00940000156024; -.
DR HOGENOM; CLU_001666_6_1_1; -.
DR InParanoid; Q1LXK4; -.
DR OMA; NSIAEMW; -.
DR OrthoDB; 286011at2759; -.
DR PhylomeDB; Q1LXK4; -.
DR TreeFam; TF323999; -.
DR PRO; PR:Q1LXK4; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 8.
DR Bgee; ENSDARG00000061177; Expressed in spleen and 17 other tissues.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0043186; C:P granule; IBA:GO_Central.
DR GO; GO:0000932; C:P-body; ISS:UniProtKB.
DR GO; GO:0032574; F:5'-3' RNA helicase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0035279; P:miRNA-mediated gene silencing by mRNA destabilization; ISS:UniProtKB.
DR GO; GO:0035194; P:post-transcriptional gene silencing by RNA; IBA:GO_Central.
DR CDD; cd18808; SF1_C_Upf1; 1.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR045055; DNA2/NAM7-like.
DR InterPro; IPR041679; DNA2/NAM7-like_C.
DR InterPro; IPR041677; DNA2/NAM7_AAA_11.
DR InterPro; IPR026122; MOV-10.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR10887; PTHR10887; 1.
DR PANTHER; PTHR10887:SF322; PTHR10887:SF322; 1.
DR Pfam; PF13086; AAA_11; 2.
DR Pfam; PF13087; AAA_12; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 2: Evidence at transcript level;
KW ATP-binding; Cytoplasm; Helicase; Hydrolase; Nucleotide-binding;
KW Reference proteome; RNA-binding; RNA-mediated gene silencing.
FT CHAIN 1..1013
FT /note="Putative helicase mov-10-B.1"
FT /id="PRO_0000374668"
FT REGION 91..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 672..675
FT /note="DEAG box"
FT COMPBIAS 91..124
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 550..557
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250"
SQ SEQUENCE 1013 AA; 116407 MW; 47A227CE99D1CC9F CRC64;
MSRKYRKKLS RDDIRAVGFD FIEFLDDRET RSTTDRNTLK EIYNEQFRDR DGVRDPNFSS
VLFALTRSSR TRVTRSEVFF DKKIRVRQND QWSRPYRSQQ NHATPHLNDA ISRPSTTRVS
DPSSVPEPEN RVIARRRLAK TIMRQGNSED MSVFFADKYG VRVSSELQIE DGKIHWCVEG
AEVHELKLFV ENTGQEAILF TCFSALHYLQ YFTLDDSQRV RKDNPHRLEP NETYEVILRF
KSDQIGVYPA TLAFEFKENQ DTRPFHIVRF IEAQHRSELT AQLGPTEPFR PKRLDTNQPM
KWSIDEGFKP ESSSQNFLKF VVPLDNYNCP SYTSALIEVL KGNRSSGKQL QEHQLTLESD
LSFNNYMDRF DLLLYLEEDQ MRMDIKRYNK KDVSMVRDRD KKLLVLELPG VSENRPSVLR
GDHLLLTKSE ELQNSNVTKY KGYVHRVELD QVKLGFSKRL LERFIDNMKF SVEFTINRLP
LRLQHRAVHM VVQHHLKDVL FPVASRRLNP VSPSALRLFD QKLEKNPEQK TAVCNIVAGT
SKPAPYLVFG PPGTGKTVTI VEAIKQVEKN TGGARILACA PSNSAADQLG EKLITSQHVD
ARNIYRIYAS SRNPKEIPKV LENNSNVEGE NIIFPCKEDL MPYKIVVCTL VTAGRLVSGG
FPVGHFSHIF VDEAGHAVEP EIVISVAGLL NAETGQLVLA GDPKQLGPIL RSPFAIKYGL
GLSLLERLMT QNELYQKGDT GFDNRYVTKL LQNYRSHPSI LKVPNELFYD NELKACADEI
SSRQYCTWEH LPKRGFPVIF HGVVGKDERE STSPSFFNTS EIDKIMDYLK KLLLTQAKKG
IAKISPKDIG IIAPYRKQVE KIRQAIKIHR ELKSLSGIEE LKVGSVEEFQ GQERKVIIVS
TVRSSKEHII LDDKFNIGFL KNEKRFNVAV TRAKALLIMV GNPIILRTDE IWGRFMNYCI
QERGYTGYDI THLEETDVIA ERLLSLNIRQ EITVETEESV VQQFLSPPWR HEH