M10B2_DANRE
ID M10B2_DANRE Reviewed; 1015 AA.
AC Q1LXK5;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 30-MAY-2006, sequence version 1.
DT 03-AUG-2022, entry version 89.
DE RecName: Full=Putative helicase mov-10-B.2;
DE EC=3.6.4.13;
GN Name=mov10b.2; ORFNames=si:dkeyp-38g6.3;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
CC -!- FUNCTION: Probable RNA helicase. Required for RNA-mediated gene
CC silencing by the RNA-induced silencing complex (RISC). Required for
CC both miRNA-mediated translational repression and miRNA-mediated
CC cleavage of complementary mRNAs by RISC (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC -!- SUBCELLULAR LOCATION: Cytoplasm, P-body {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the DNA2/NAM7 helicase family. SDE3 subfamily.
CC {ECO:0000305}.
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DR EMBL; BX323059; CAK11381.1; -; Genomic_DNA.
DR RefSeq; NP_001037805.1; NM_001044340.2.
DR AlphaFoldDB; Q1LXK5; -.
DR SMR; Q1LXK5; -.
DR STRING; 7955.ENSDARP00000072953; -.
DR PaxDb; Q1LXK5; -.
DR PRIDE; Q1LXK5; -.
DR Ensembl; ENSDART00000078491; ENSDARP00000072953; ENSDARG00000056065.
DR GeneID; 555950; -.
DR KEGG; dre:555950; -.
DR CTD; 555950; -.
DR ZFIN; ZDB-GENE-060526-371; mov10b.2.
DR eggNOG; KOG1804; Eukaryota.
DR GeneTree; ENSGT00940000156024; -.
DR HOGENOM; CLU_001666_6_1_1; -.
DR InParanoid; Q1LXK5; -.
DR OMA; YVDQWHT; -.
DR OrthoDB; 286011at2759; -.
DR PhylomeDB; Q1LXK5; -.
DR TreeFam; TF323999; -.
DR PRO; PR:Q1LXK5; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 8.
DR Bgee; ENSDARG00000056065; Expressed in liver and 12 other tissues.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0043186; C:P granule; IBA:GO_Central.
DR GO; GO:0000932; C:P-body; ISS:UniProtKB.
DR GO; GO:0032574; F:5'-3' RNA helicase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0035279; P:miRNA-mediated gene silencing by mRNA destabilization; ISS:UniProtKB.
DR GO; GO:0035194; P:post-transcriptional gene silencing by RNA; IBA:GO_Central.
DR CDD; cd18808; SF1_C_Upf1; 1.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR045055; DNA2/NAM7-like.
DR InterPro; IPR041679; DNA2/NAM7-like_C.
DR InterPro; IPR041677; DNA2/NAM7_AAA_11.
DR InterPro; IPR026122; MOV-10.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR10887; PTHR10887; 1.
DR PANTHER; PTHR10887:SF322; PTHR10887:SF322; 1.
DR Pfam; PF13086; AAA_11; 2.
DR Pfam; PF13087; AAA_12; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Cytoplasm; Helicase; Hydrolase; Nucleotide-binding;
KW Reference proteome; RNA-binding; RNA-mediated gene silencing.
FT CHAIN 1..1015
FT /note="Putative helicase mov-10-B.2"
FT /id="PRO_0000374669"
FT REGION 94..130
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 677..680
FT /note="DEAG box"
FT COMPBIAS 100..126
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 555..562
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250"
SQ SEQUENCE 1015 AA; 116510 MW; 0895FC71E3B7E815 CRC64;
MSRRNRNNYL SIAAVRTIGL DFIEMLEETN RRSISDRNTL TDIYNTEFRD RDGGVKDPNF
SRVLYALRNA NKARLSRTGR VYFNTNVRTG LHDQWFRPRR RQQNQANATP GNVSSVTPSS
DQGPSCPESG VRARRKLVKY ILQRLNTTDR SHFIADKWGV RVSSELYIED GKIRISVDEA
EVYELKLFVE NTGQEAVYFT YYTALCWLQY FTLEDSRKVT RNNPLRLEPR EKYEVIVRFK
SSHVGVYSAT LAFEFKKNTQ PTTRSFHIVR FIEAEYRSKL AALLGPTEPY KPLRLNISEP
ENCIIDEGFP PDGYLQNFLV NVLPLGKYIP PPDTTILAEL LKEDCSSRIF RGKLKDLQSL
LQSPLTFDNY AERFDLLLYL EECQMHVDIK RYNKDSVTLH RDRDKRLMGL NLPGVSENRP
SVLRGDHLLL TKSEEVTFSN VTKYKGYVHR VELDQVKLGL SKRFLKDVYI DKMKFRVEFT
VNRIPVRLQH RAVHMAVQHN LKDVLFPMAS RSLNPVSPPA LRLFDRKLEY NFQQYSAVCN
IVAGTSKPAP YLVFGPPGTG KTVTIVEAIK QVEKNIPDAY ILACAPSNSA ADQLCEKLIT
SEHVDAHKIY RLYASSRNQK DIPKILKDNC NVDEEMIDFP CKEDLMSYKI LICTLVTAGR
LVTGGFSEDH FTHNFVDEAG HAVESETIIS VAGLLNAEKG QLVLAGDPKQ LGPILRSPLA
INHGLDVSLL ERLMTQNDLY KRGDVEFDNR YVSKLIMNYR SHPYILEVPN RLFYDGELKA
CADEISSNQY CMWEHLPSKG FPVIFHGVPG KDERESNSPS FFNIYEINIL VDYLKKLLLT
QPKKGISRIF PKDIGIIAPY RKQVEKIKRA IDADKDFQDY MGIDNLKVGS VEEFQGQERK
VIMVSTVRSS VKYISLDETF NIGFLKNEKR FNVAVTRAKS LLIMVGNPMI LRTDESWGRF
IDFCLERGGY TGISITSVER IDDVESRLLA LNIQDEETEE SPVQRYVDPE FRNDY