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ARGI2_RAT
ID   ARGI2_RAT               Reviewed;         354 AA.
AC   O08701; P97539;
DT   15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT   01-JUL-1997, sequence version 1.
DT   03-AUG-2022, entry version 143.
DE   RecName: Full=Arginase-2, mitochondrial;
DE            EC=3.5.3.1 {ECO:0000250|UniProtKB:P05089};
DE   AltName: Full=Arginase II;
DE   AltName: Full=Kidney-type arginase;
DE   AltName: Full=Non-hepatic arginase;
DE   AltName: Full=Type II arginase;
DE   Flags: Precursor;
GN   Name=Arg2;
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Rattus.
OX   NCBI_TaxID=10116;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=Sprague-Dawley; TISSUE=Kidney;
RX   PubMed=9608538; DOI=10.1006/mgme.1997.2669;
RA   Iyer R.K., Bando J.M., Jenkinson C.P., Vockley J.G., Kim P.S., Kern R.M.,
RA   Cederbaum S.D., Grody W.W.;
RT   "Cloning and characterization of the mouse and rat type II arginase
RT   genes.";
RL   Mol. Genet. Metab. 63:168-175(1998).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA] OF 87-168.
RC   STRAIN=Wistar; TISSUE=Small intestine;
RX   PubMed=8898077; DOI=10.1016/0014-5793(96)01015-0;
RA   Gotoh T., Sonoki T., Nagasaki A., Terada K., Takiguchi M., Mori M.;
RT   "Molecular cloning of cDNA for nonhepatic mitochondrial arginase (arginase
RT   II) and comparison of its induction with nitric oxide synthase in a murine
RT   macrophage-like cell line.";
RL   FEBS Lett. 395:119-122(1996).
CC   -!- FUNCTION: May play a role in the regulation of extra-urea cycle
CC       arginine metabolism and also in down-regulation of nitric oxide
CC       synthesis. Extrahepatic arginase functions to regulate L-arginine
CC       bioavailability to nitric oxid synthase (NOS). Arginine metabolism is a
CC       critical regulator of innate and adaptive immune responses. Seems to be
CC       involved in negative regulation of the survival capacity of activated T
CC       cells. May suppress inflammation-related signaling in asthmatic airway
CC       epithelium. May play a role in promoting prenatal immune suppression.
CC       Regulates RPS6KB1 signaling, which promotes endothelial cell senescence
CC       and inflammation and implicates NOS3/eNOS dysfunction. Can inhibit
CC       endothelial autophagy independently of its enzymatic activity
CC       implicating mTORC2 signaling. Involved in vascular smooth muscle cell
CC       senescence and apoptosis independently of its enzymatic activity.
CC       {ECO:0000250|UniProtKB:O08691, ECO:0000250|UniProtKB:P78540}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=H2O + L-arginine = L-ornithine + urea; Xref=Rhea:RHEA:20569,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:16199, ChEBI:CHEBI:32682,
CC         ChEBI:CHEBI:46911; EC=3.5.3.1;
CC         Evidence={ECO:0000250|UniProtKB:P05089};
CC   -!- COFACTOR:
CC       Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC         Evidence={ECO:0000255|PROSITE-ProRule:PRU00742};
CC       Note=Binds 2 manganese ions per subunit. {ECO:0000255|PROSITE-
CC       ProRule:PRU00742};
CC   -!- PATHWAY: Nitrogen metabolism; urea cycle; L-ornithine and urea from L-
CC       arginine: step 1/1. {ECO:0000250|UniProtKB:P05089}.
CC   -!- SUBUNIT: Homotrimer. {ECO:0000250|UniProtKB:P78540}.
CC   -!- INTERACTION:
CC       O08701; P29476: Nos1; NbExp=2; IntAct=EBI-15573788, EBI-349460;
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000250|UniProtKB:O08691,
CC       ECO:0000250|UniProtKB:P78540}.
CC   -!- SIMILARITY: Belongs to the arginase family. {ECO:0000255|PROSITE-
CC       ProRule:PRU00742}.
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DR   EMBL; U90887; AAC22580.1; -; mRNA.
DR   EMBL; D86928; BAA13183.1; -; mRNA.
DR   RefSeq; NP_062041.1; NM_019168.1.
DR   AlphaFoldDB; O08701; -.
DR   SMR; O08701; -.
DR   DIP; DIP-61133N; -.
DR   IntAct; O08701; 1.
DR   STRING; 10116.ENSRNOP00000015083; -.
DR   PaxDb; O08701; -.
DR   PRIDE; O08701; -.
DR   GeneID; 29215; -.
DR   KEGG; rno:29215; -.
DR   UCSC; RGD:2151; rat.
DR   CTD; 384; -.
DR   RGD; 2151; Arg2.
DR   eggNOG; KOG2965; Eukaryota.
DR   InParanoid; O08701; -.
DR   OrthoDB; 1179130at2759; -.
DR   PhylomeDB; O08701; -.
DR   BRENDA; 3.5.3.1; 5301.
DR   Reactome; R-RNO-70635; Urea cycle.
DR   SABIO-RK; O08701; -.
DR   UniPathway; UPA00158; UER00270.
DR   PRO; PR:O08701; -.
DR   Proteomes; UP000002494; Unplaced.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0005739; C:mitochondrion; IDA:RGD.
DR   GO; GO:0004053; F:arginase activity; IDA:RGD.
DR   GO; GO:0030145; F:manganese ion binding; IBA:GO_Central.
DR   GO; GO:0050998; F:nitric-oxide synthase binding; IPI:RGD.
DR   GO; GO:0002250; P:adaptive immune response; IEA:UniProtKB-KW.
DR   GO; GO:0006915; P:apoptotic process; IEP:RGD.
DR   GO; GO:0019547; P:arginine catabolic process to ornithine; IDA:RGD.
DR   GO; GO:0006525; P:arginine metabolic process; IMP:RGD.
DR   GO; GO:0071549; P:cellular response to dexamethasone stimulus; IEP:RGD.
DR   GO; GO:0071346; P:cellular response to interferon-gamma; IEP:RGD.
DR   GO; GO:0071353; P:cellular response to interleukin-4; IEP:RGD.
DR   GO; GO:0071222; P:cellular response to lipopolysaccharide; IEP:RGD.
DR   GO; GO:0030324; P:lung development; IEP:RGD.
DR   GO; GO:0060135; P:maternal process involved in female pregnancy; IEP:RGD.
DR   GO; GO:0007494; P:midgut development; IEP:RGD.
DR   GO; GO:1905403; P:negative regulation of activated CD8-positive, alpha-beta T cell apoptotic process; ISO:RGD.
DR   GO; GO:2000562; P:negative regulation of CD4-positive, alpha-beta T cell proliferation; ISO:RGD.
DR   GO; GO:0071644; P:negative regulation of chemokine (C-C motif) ligand 4 production; ISO:RGD.
DR   GO; GO:0071650; P:negative regulation of chemokine (C-C motif) ligand 5 production; ISO:RGD.
DR   GO; GO:1900425; P:negative regulation of defense response to bacterium; ISO:RGD.
DR   GO; GO:0032696; P:negative regulation of interleukin-13 production; ISO:RGD.
DR   GO; GO:0032700; P:negative regulation of interleukin-17 production; ISO:RGD.
DR   GO; GO:0071641; P:negative regulation of macrophage inflammatory protein 1 alpha production; ISO:RGD.
DR   GO; GO:0051001; P:negative regulation of nitric-oxide synthase activity; IMP:RGD.
DR   GO; GO:0045988; P:negative regulation of striated muscle contraction; IMP:RGD.
DR   GO; GO:0032720; P:negative regulation of tumor necrosis factor production; ISO:RGD.
DR   GO; GO:0002829; P:negative regulation of type 2 immune response; ISO:RGD.
DR   GO; GO:2000774; P:positive regulation of cellular senescence; ISO:RGD.
DR   GO; GO:0032651; P:regulation of interleukin-1 beta production; ISO:RGD.
DR   GO; GO:1905541; P:regulation of L-arginine import across plasma membrane; IDA:RGD.
DR   GO; GO:0045428; P:regulation of nitric oxide biosynthetic process; IEP:RGD.
DR   GO; GO:1903426; P:regulation of reactive oxygen species biosynthetic process; ISO:RGD.
DR   GO; GO:0014075; P:response to amine; IEP:RGD.
DR   GO; GO:0043200; P:response to amino acid; IEP:RGD.
DR   GO; GO:0048678; P:response to axon injury; IEP:RGD.
DR   GO; GO:0046686; P:response to cadmium ion; IEP:RGD.
DR   GO; GO:0009749; P:response to glucose; IEP:RGD.
DR   GO; GO:0009635; P:response to herbicide; IEP:RGD.
DR   GO; GO:0009725; P:response to hormone; IEP:RGD.
DR   GO; GO:0001666; P:response to hypoxia; IEP:RGD.
DR   GO; GO:0046689; P:response to mercury ion; IEP:RGD.
DR   GO; GO:0007584; P:response to nutrient; IEP:RGD.
DR   GO; GO:0010269; P:response to selenium ion; IEP:RGD.
DR   GO; GO:0033197; P:response to vitamin E; IEP:RGD.
DR   GO; GO:0009410; P:response to xenobiotic stimulus; IEP:RGD.
DR   GO; GO:0006941; P:striated muscle contraction; ISO:RGD.
DR   GO; GO:0000050; P:urea cycle; IEA:UniProtKB-UniPathway.
DR   GO; GO:0001657; P:ureteric bud development; ISO:RGD.
DR   CDD; cd09989; Arginase; 1.
DR   InterPro; IPR014033; Arginase.
DR   InterPro; IPR006035; Ureohydrolase.
DR   InterPro; IPR023696; Ureohydrolase_dom_sf.
DR   InterPro; IPR020855; Ureohydrolase_Mn_BS.
DR   PANTHER; PTHR43782; PTHR43782; 1.
DR   Pfam; PF00491; Arginase; 1.
DR   PIRSF; PIRSF036979; Arginase; 1.
DR   PRINTS; PR00116; ARGINASE.
DR   SUPFAM; SSF52768; SSF52768; 1.
DR   TIGRFAMs; TIGR01229; rocF_arginase; 1.
DR   PROSITE; PS01053; ARGINASE_1; 1.
DR   PROSITE; PS51409; ARGINASE_2; 1.
PE   1: Evidence at protein level;
KW   Adaptive immunity; Arginine metabolism; Hydrolase; Immunity;
KW   Innate immunity; Manganese; Metal-binding; Mitochondrion;
KW   Reference proteome; Transit peptide; Urea cycle.
FT   TRANSIT         1..22
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           23..354
FT                   /note="Arginase-2, mitochondrial"
FT                   /id="PRO_0000002086"
FT   BINDING         120
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00742"
FT   BINDING         143
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00742"
FT   BINDING         143
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00742"
FT   BINDING         145..149
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P05089"
FT   BINDING         145
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00742"
FT   BINDING         147
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00742"
FT   BINDING         156..158
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P05089"
FT   BINDING         202
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250"
FT   BINDING         251
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00742"
FT   BINDING         251
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00742"
FT   BINDING         253
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00742"
FT   BINDING         265
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P53608"
FT   BINDING         296
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P78540"
FT   CONFLICT        88
FT                   /note="Y -> N (in Ref. 2; BAA13183)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        90
FT                   /note="R -> P (in Ref. 2; BAA13183)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        100
FT                   /note="A -> S (in Ref. 2; BAA13183)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        116
FT                   /note="L -> M (in Ref. 2; BAA13183)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        119
FT                   /note="D -> Y (in Ref. 2; BAA13183)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        128
FT                   /note="S -> I (in Ref. 2; BAA13183)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        143
FT                   /note="D -> Y (in Ref. 2; BAA13183)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        164
FT                   /note="L -> V (in Ref. 2; BAA13183)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        168
FT                   /note="I -> L (in Ref. 2; BAA13183)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   354 AA;  38640 MW;  BC03E6BC99B29B8C CRC64;
     MFLRSSVSRL LHGQIPCALT RSVHSVAVVG APFSRGQKKK GVEYGPAAIR EAGLLKRLSM
     LGCHIKDFGD LSFTNVPKDD PYNNLVVYPR SVGIANQELA EVVSRAVSGG YSCVTLGGDH
     SLAIGTISGH ARHHPDLCVI WVDAHADINT PLTTVSGNIH GQPLSFLIRE LQDKVPQLPG
     FSWIKPCLSP PNLVYIGLRD VEPAEHFILK SFDIQYFSMR DIDRLGIQKV MEQTFDRLIG
     KRKRPIHLSF DIDAFDPKLA PATGTPVVGG LTYREGLYIT EEIHSTGLLS ALDLVEVNPH
     LATSEEEAKA TASLAVDVIA SSFGQTREGG HIAYDHLPTP SSPHESEKEE CVRI
 
 
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