MAB10_CAEEL
ID MAB10_CAEEL Reviewed; 582 AA.
AC Q22002;
DT 02-JUN-2021, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 2.
DT 03-AUG-2022, entry version 136.
DE RecName: Full=NAB transcription cofactor mab-10 {ECO:0000303|PubMed:21862562};
DE AltName: Full=Protein male abnormal 10 {ECO:0000312|WormBase:R166.1a};
GN Name=mab-10 {ECO:0000312|WormBase:R166.1a};
GN ORFNames=R166.1 {ECO:0000312|WormBase:R166.1a};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239 {ECO:0000312|Proteomes:UP000001940};
RN [1] {ECO:0000312|Proteomes:UP000001940}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2 {ECO:0000312|Proteomes:UP000001940};
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2] {ECO:0000305}
RP FUNCTION, INTERACTION WITH LIN-29, SUBCELLULAR LOCATION, DEVELOPMENTAL
RP STAGE, AND MUTAGENESIS OF 153-TYR--SER-582 AND 157-GLN--SER-582.
RX PubMed=21862562; DOI=10.1242/dev.065417;
RA Harris D.T., Horvitz H.R.;
RT "MAB-10/NAB acts with LIN-29/EGR to regulate terminal differentiation and
RT the transition from larva to adult in C. elegans.";
RL Development 138:4051-4062(2011).
CC -!- FUNCTION: Transcriptional cofactor (PubMed:21862562). Heterochronic
CC protein, involved in timing of a subset of differentiation events
CC during the larval-to-adult transition (PubMed:21862562). Promotes
CC hypodermal terminal differentiation, together with transcription factor
CC lin-29, perhaps as part of a transcriptional complex (PubMed:21862562).
CC Involved in regulating molting by repressing the expression of nuclear
CC hormone receptors nhr-23 and nhr-25 in the adult hypoderm, probably
CC acting in concert with lin-29 (PubMed:21862562).
CC {ECO:0000269|PubMed:21862562}.
CC -!- SUBUNIT: Interacts with transcription factor lin-29 (via C-terminus).
CC {ECO:0000269|PubMed:21862562}.
CC -!- INTERACTION:
CC Q22002; G5EC32: sorb-1; NbExp=4; IntAct=EBI-2316177, EBI-325337;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:21862562}.
CC -!- DEVELOPMENTAL STAGE: Expressed in pharyngeal cells throughout
CC development, vulval precursor cells during the larval L3 stage, and the
CC seam cells and hypodermal syncytia derived from the seam cell lineages
CC throughout the larval L4 stage and adulthood.
CC {ECO:0000269|PubMed:21862562}.
CC -!- SIMILARITY: Belongs to the NAB family. {ECO:0000305}.
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DR EMBL; BX284602; CAA90662.2; -; Genomic_DNA.
DR RefSeq; NP_496268.2; NM_063867.2.
DR AlphaFoldDB; Q22002; -.
DR SMR; Q22002; -.
DR IntAct; Q22002; 7.
DR STRING; 6239.R166.1; -.
DR PaxDb; Q22002; -.
DR EnsemblMetazoa; R166.1a.1; R166.1a.1; WBGene00003107.
DR EnsemblMetazoa; R166.1a.2; R166.1a.2; WBGene00003107.
DR GeneID; 187916; -.
DR KEGG; cel:CELE_R166.1; -.
DR UCSC; R166.1; c. elegans.
DR CTD; 187916; -.
DR WormBase; R166.1a; CE43283; WBGene00003107; mab-10.
DR eggNOG; KOG3835; Eukaryota.
DR GeneTree; ENSGT00390000006330; -.
DR HOGENOM; CLU_475872_0_0_1; -.
DR InParanoid; Q22002; -.
DR OMA; TCDEHEF; -.
DR OrthoDB; 1002244at2759; -.
DR PhylomeDB; Q22002; -.
DR Reactome; R-CEL-9031628; NGF-stimulated transcription.
DR Proteomes; UP000001940; Chromosome II.
DR Bgee; WBGene00003107; Expressed in gonad and 26 other tissues.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0140297; F:DNA-binding transcription factor binding; IPI:UniProtKB.
DR GO; GO:0003712; F:transcription coregulator activity; IMP:UniProtKB.
DR GO; GO:0010458; P:exit from mitosis; IMP:UniProtKB.
DR GO; GO:0022404; P:molting cycle process; IMP:UniProtKB.
DR GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IEA:InterPro.
DR GO; GO:0040034; P:regulation of development, heterochronic; IMP:UniProtKB.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR GO; GO:0040028; P:regulation of vulval development; IMP:UniProtKB.
DR Gene3D; 1.20.120.2010; -; 1.
DR InterPro; IPR006989; NAB_co-repressor_dom.
DR InterPro; IPR039040; NAB_fam.
DR InterPro; IPR006988; Nab_N.
DR InterPro; IPR038398; NCD2_sf.
DR PANTHER; PTHR12623; PTHR12623; 1.
DR Pfam; PF04904; NCD1; 1.
DR Pfam; PF04905; NCD2; 1.
PE 1: Evidence at protein level;
KW Nucleus; Reference proteome; Repressor; Transcription;
KW Transcription regulation.
FT CHAIN 1..582
FT /note="NAB transcription cofactor mab-10"
FT /id="PRO_0000452804"
FT REGION 1..84
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 83..161
FT /note="NCD1"
FT /evidence="ECO:0000255"
FT REGION 257..287
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 333..365
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 396..519
FT /note="NCD2"
FT /evidence="ECO:0000255"
FT REGION 516..582
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..76
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 257..282
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 537..551
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MUTAGEN 153..582
FT /note="Missing: In n5117; fail to exit the molting cycle
FT and inappropriately initiate an adult molt; effect more
FT common in males than in hermaphrodites."
FT /evidence="ECO:0000269|PubMed:21862562"
FT MUTAGEN 157..582
FT /note="Missing: In n5118; fail to exit the molting cycle
FT and inappropriately initiate an adult molt; effect more
FT common in males than in hermaphrodites."
FT /evidence="ECO:0000269|PubMed:21862562"
SQ SEQUENCE 582 AA; 61771 MW; C02DBE3F88CA75F7 CRC64;
MSSSSSSSLP TSSASTTTSS ITSRPSASHH LESILSSSSS SPSILSSLTT QSTSSIPTSS
SSSSQRQSTS NADRPVSPKP MPTPTTLSEW QLLAVLSKAN LVQYYDVFIA QGGDDINQIM
ACEEREFLEI MNLVGMLPKP LHVRRMQRAL AEYSQDQTAF NLAALQQIGP PPPLNYTPAG
TDPMALLLPG IAAATSPKFP SLRFLSQLSS VAEKVSTPSE AADTSSSSPS LNLNTTSSNS
VPLAFKFSTP LLESLASDQQ SSSTSSVRSV LPSTSSNTSH PELPAGILPA TTTNVSAAVP
PPSSRATANV FSGNSIGLNF SGAASVTRHL VVPPSSTSIQ QPSTSFGRSS SITGQEKEGS
SSPFLGVGYS QPYGNDFVSL GDFDPNNPSL TENPTLSTAQ ISRLAECALA ASKNLPPLPP
RLVQNKKRVS KEVIELLKCS PATPSMIHAF RKYSAIYGRF DTKRKPHKVL TLHETTVNEA
AAQLCLLVPS LLTRRDELFP LARQIVKDAG YNYAKSRKRP CDPADLHSPI SSPGNSPPPQ
ESEFDEQPSS SSGAFKEEER PPIPPEAWAA IIEKMKGELP ES