ID   MAD17_ORYSJ             Reviewed;         249 AA.
AC   Q7XUN2; Q9AUJ0; Q9SES9;
DT   04-APR-2006, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2004, sequence version 2.
DT   25-MAY-2022, entry version 105.
DE   RecName: Full=MADS-box transcription factor 17;
DE   AltName: Full=NMADS3;
DE   AltName: Full=OsMADS17;
DE   AltName: Full=RMADS213;
GN   Name=MADS17; OrderedLocusNames=Os04g0580700, LOC_Os04g49150;
GN   ORFNames=OSJNBa0064M23.11;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], AND INTERACTION WITH MADS6.
RC   TISSUE=Flower;
RX   PubMed=10444103; DOI=10.1104/pp.120.4.1193;
RA   Moon Y.-H., Kang H.-G., Jung J.-Y., Jeon J.-S., Sung S.-K., An G.;
RT   "Determination of the motif responsible for interaction between the rice
RT   APETALA1/AGAMOUS-LIKE9 family proteins using a yeast two-hybrid system.";
RL   Plant Physiol. 120:1193-1204(1999).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RA   Yao Q., Peng R., Xiong A.;
RL   Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12447439; DOI=10.1038/nature01183;
RA   Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA   Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA   Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA   Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA   Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA   Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA   Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA   Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA   Li J., Hong G., Xue Y., Han B.;
RT   "Sequence and analysis of rice chromosome 4.";
RL   Nature 420:316-320(2002).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [5]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [MRNA] OF 8-249.
RA   Yuan Z., Qian X., Liu J., Liu J., Qian M., Yang J.;
RT   "Cloning and characterization of two cDNAs encoding rice MADS box
RT   protein.";
RL   Prog. Nat. Sci. 10:357-363(2000).
RN   [7]
RP   FUNCTION, TISSUE SPECIFICITY, AND DISRUPTION PHENOTYPE.
RX   PubMed=19820190; DOI=10.1105/tpc.109.068742;
RA   Ohmori S., Kimizu M., Sugita M., Miyao A., Hirochika H., Uchida E.,
RA   Nagato Y., Yoshida H.;
RT   "MOSAIC FLORAL ORGANS1, an AGL6-like MADS box gene, regulates floral organ
RT   identity and meristem fate in rice.";
RL   Plant Cell 21:3008-3025(2009).
CC   -!- FUNCTION: Probable transcription factor. Plays minor but redundant
CC       roles with MADS6 in floral development. {ECO:0000269|PubMed:19820190}.
CC   -!- SUBUNIT: May interact with the K-box of MADS6.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- TISSUE SPECIFICITY: Expressed in the floral meristem, lodicule, palea,
CC       lemma, receptacle, empty glume, stamen, pistil, and ovule.
CC       {ECO:0000269|PubMed:19820190}.
CC   -!- DISRUPTION PHENOTYPE: No visible phenotype, probably due to redundancy
CC       with MADS6. {ECO:0000269|PubMed:19820190}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAK26241.1; Type=Frameshift; Evidence={ECO:0000305};
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DR   EMBL; AF109153; AAF21900.1; -; mRNA.
DR   EMBL; AY551918; AAS59824.1; -; mRNA.
DR   EMBL; AL606688; CAD41166.2; -; Genomic_DNA.
DR   EMBL; AP014960; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AF095646; AAK26241.1; ALT_FRAME; mRNA.
DR   AlphaFoldDB; Q7XUN2; -.
DR   SMR; Q7XUN2; -.
DR   IntAct; Q7XUN2; 3.
DR   STRING; 4530.OS04T0580700-01; -.
DR   PaxDb; Q7XUN2; -.
DR   eggNOG; KOG0014; Eukaryota.
DR   InParanoid; Q7XUN2; -.
DR   Proteomes; UP000000763; Chromosome 4.
DR   Proteomes; UP000059680; Chromosome 4.
DR   Genevisible; Q7XUN2; OS.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR   GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   GO; GO:0010093; P:specification of floral organ identity; IMP:UniProtKB.
DR   CDD; cd00265; MADS_MEF2_like; 1.
DR   Gene3D; 3.40.1810.10; -; 1.
DR   InterPro; IPR033896; MADS_MEF2-like.
DR   InterPro; IPR002487; TF_Kbox.
DR   InterPro; IPR002100; TF_MADSbox.
DR   InterPro; IPR036879; TF_MADSbox_sf.
DR   Pfam; PF01486; K-box; 1.
DR   Pfam; PF00319; SRF-TF; 1.
DR   PRINTS; PR00404; MADSDOMAIN.
DR   SMART; SM00432; MADS; 1.
DR   SUPFAM; SSF55455; SSF55455; 1.
DR   PROSITE; PS51297; K_BOX; 1.
DR   PROSITE; PS00350; MADS_BOX_1; 1.
DR   PROSITE; PS50066; MADS_BOX_2; 1.
PE   1: Evidence at protein level;
KW   DNA-binding; Nucleus; Reference proteome; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..249
FT                   /note="MADS-box transcription factor 17"
FT                   /id="PRO_0000229901"
FT   DOMAIN          1..61
FT                   /note="MADS-box"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00251"
FT   DOMAIN          88..178
FT                   /note="K-box"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00629"
FT   REGION          228..249
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   CONFLICT        8..10
FT                   /note="LKR -> IKS (in Ref. 6; AAK26241)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        16
FT                   /note="N -> T (in Ref. 6; AAK26241)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   249 AA;  28184 MW;  D4D5D46FD2881B4B CRC64;
     MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSA
     GINKTLEKYN SCCYNAQGSN SALAGGEHQS WYQEMSRLKT KLECLQRSQR HMLGEDLGPL
     SIKELQQLEK QLEYSLSQAR QRKTQIMMEQ VDDLRRKERQ LGELNKQLKN KLEAEADSSN
     CRSAIQDSWV HGTVVSGGRV LNAQPPPDID CEPTLQIGYY QFVRPEAANP RSNGGGGDQN
     NNFVMGWPL