MAD26_ORYSI
ID MAD26_ORYSI Reviewed; 222 AA.
AC A2YQK9; Q8L887; Q9XH60; Q9XJ62;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-JUL-2007, sequence version 2.
DT 25-MAY-2022, entry version 76.
DE RecName: Full=MADS-box transcription factor 26;
DE AltName: Full=FDRMADS3;
DE AltName: Full=OsMADS26;
DE AltName: Full=RMADS220;
GN Name=MADS26; ORFNames=OsI_026602;
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Chen R., Gao Z., Jia H.-W., Sun C.-R.;
RT "Oryza sativa (indica cultivar-group) MADS-box protein FDRMADS3.";
RL Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- FUNCTION: Probable transcription factor.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD40952.1; Type=Frameshift; Evidence={ECO:0000305};
CC Sequence=AAM55472.1; Type=Frameshift; Evidence={ECO:0000305};
CC Sequence=EAZ05370.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF141868; AAD40952.1; ALT_FRAME; mRNA.
DR EMBL; AY115556; AAM55472.1; ALT_FRAME; mRNA.
DR EMBL; CM000133; EAZ05370.1; ALT_SEQ; Genomic_DNA.
DR AlphaFoldDB; A2YQK9; -.
DR SMR; A2YQK9; -.
DR STRING; 39946.A2YQK9; -.
DR HOGENOM; CLU_053053_0_3_1; -.
DR Proteomes; UP000007015; Chromosome 8.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd00265; MADS_MEF2_like; 1.
DR Gene3D; 3.40.1810.10; -; 1.
DR InterPro; IPR033896; MADS_MEF2-like.
DR InterPro; IPR002487; TF_Kbox.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR Pfam; PF01486; K-box; 1.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SSF55455; 1.
DR PROSITE; PS51297; K_BOX; 1.
DR PROSITE; PS00350; MADS_BOX_1; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..222
FT /note="MADS-box transcription factor 26"
FT /id="PRO_0000296351"
FT DOMAIN 1..61
FT /note="MADS-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00251"
FT DOMAIN 85..176
FT /note="K-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00629"
FT CONFLICT 14..16
FT /note="PVH -> STN (in Ref. 1; AAD40952)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 222 AA; 25217 MW; CEBFC35A44D77D79 CRC64;
MARGKVQLRR IENPVHRQVT FCKRRAGLLK KARELSILCE ADIGIIIFSA HGKLYDLATT
GTMEELIERY KSASGEQANA CGDQRMDPKQ EAMVLKQEIN LLQKGLRYIY GNRANEHMTV
EELNALERYL EIWMYNIRSA KMQIMIQEIQ ALKSKEGMLK AANEILQEKI VEQNGLIDVG
MMVADQQNGH FSTVPLLEEI TNPLTILSGY STCRGSEMGY SF