位置:首页 > 蛋白库 > MAD30_ORYSJ
MAD30_ORYSJ
ID   MAD30_ORYSJ             Reviewed;         221 AA.
AC   Q655V4; Q84ND1;
DT   04-APR-2006, integrated into UniProtKB/Swiss-Prot.
DT   25-OCT-2004, sequence version 1.
DT   03-AUG-2022, entry version 95.
DE   RecName: Full=MADS-box transcription factor 30;
DE   AltName: Full=OsMADS30;
GN   Name=MADS30; OrderedLocusNames=Os06g0667200, LOC_Os06g45650;
GN   ORFNames=P0637D03.37;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RC   STRAIN=cv. Dongjin;
RX   PubMed=14701936; DOI=10.1093/pcp/pcg156;
RA   Lee S., Kim J., Son J.-S., Nam J., Jeong D.-H., Lee K., Jang S., Yoo J.,
RA   Lee J., Lee D.-Y., Kang H.-G., An G.;
RT   "Systematic reverse genetic screening of T-DNA tagged genes in rice for
RT   functional genomic analyses: MADS-box genes as a test case.";
RL   Plant Cell Physiol. 44:1403-1411(2003).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
CC   -!- FUNCTION: Probable transcription factor.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- TISSUE SPECIFICITY: Ubiquitous. {ECO:0000269|PubMed:14701936}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AY174093; AAO39706.1; -; mRNA.
DR   EMBL; AP003633; BAD45413.1; -; Genomic_DNA.
DR   EMBL; AP014962; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_015644347.1; XM_015788861.1.
DR   AlphaFoldDB; Q655V4; -.
DR   SMR; Q655V4; -.
DR   STRING; 4530.OS06T0667200-00; -.
DR   PaxDb; Q655V4; -.
DR   PRIDE; Q655V4; -.
DR   EnsemblPlants; Os06t0667200-01; Os06t0667200-01; Os06g0667200.
DR   Gramene; Os06t0667200-01; Os06t0667200-01; Os06g0667200.
DR   KEGG; osa:4341786; -.
DR   eggNOG; KOG0014; Eukaryota.
DR   InParanoid; Q655V4; -.
DR   OrthoDB; 1609924at2759; -.
DR   Proteomes; UP000000763; Chromosome 6.
DR   Proteomes; UP000059680; Chromosome 6.
DR   ExpressionAtlas; Q655V4; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR   GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   CDD; cd00265; MADS_MEF2_like; 1.
DR   Gene3D; 3.40.1810.10; -; 1.
DR   InterPro; IPR033896; MADS_MEF2-like.
DR   InterPro; IPR002487; TF_Kbox.
DR   InterPro; IPR002100; TF_MADSbox.
DR   InterPro; IPR036879; TF_MADSbox_sf.
DR   Pfam; PF01486; K-box; 1.
DR   Pfam; PF00319; SRF-TF; 1.
DR   PRINTS; PR00404; MADSDOMAIN.
DR   SMART; SM00432; MADS; 1.
DR   SUPFAM; SSF55455; SSF55455; 1.
DR   PROSITE; PS51297; K_BOX; 1.
DR   PROSITE; PS50066; MADS_BOX_2; 1.
PE   2: Evidence at transcript level;
KW   DNA-binding; Nucleus; Reference proteome; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..221
FT                   /note="MADS-box transcription factor 30"
FT                   /id="PRO_0000229910"
FT   DOMAIN          1..61
FT                   /note="MADS-box"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00251"
FT   DOMAIN          87..178
FT                   /note="K-box"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00629"
FT   CONFLICT        3
FT                   /note="Q -> R (in Ref. 1; AAO39706)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   221 AA;  25781 MW;  D78408074A9B3993 CRC64;
     MGQGKIEMKR IEDATRRQVT FSKRRAGFLK KANELAVLCD AQVGVVVFSD KGKLFDFCSP
     PVILMELFHR YEITTRNTRL QETNRDDEQM VMEITRLRNE IDQLEASLRR QTGEDLSSVS
     TVDELSQLQL QLESSLSKVH ARKDELMSQQ LEDMRRMHQT VHEQNNFLCR MVTKILLLNV
     ITIMILAAMI SITHARIALD DCMQLGYIVI KQENSWRFWF I
 
 
维奥蛋白资源库 - 中文蛋白资源 CopyRight © 2010-2024