MADS1_ORYSI
ID MADS1_ORYSI Reviewed; 257 AA.
AC A2XDY1; B8AQT4; Q3ZES6; Q40700;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-JUL-2007, sequence version 2.
DT 25-MAY-2022, entry version 84.
DE RecName: Full=MADS-box transcription factor 1;
DE AltName: Full=OsMADS1;
DE AltName: Full=Protein LEAFY HULL STERILE 1;
DE AltName: Full=Protein SEPALLATA-like;
GN Name=MADS1; Synonyms=LHS1; ORFNames=OsI_10526;
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-61, FUNCTION, DEVELOPMENTAL STAGE,
RP AND DISRUPTION PHENOTYPE.
RX PubMed=16146529; DOI=10.1111/j.1365-313x.2005.02504.x;
RA Prasad K., Parameswaran S., Vijayraghavan U.;
RT "OsMADS1, a rice MADS-box factor, controls differentiation of specific cell
RT types in the lemma and palea and is an early-acting regulator of inner
RT floral organs.";
RL Plant J. 43:915-928(2005).
CC -!- FUNCTION: Probable transcription factor involved in the development of
CC floral organs. Required for the formation of inner floral organs
CC (lodicules, stamens and carpels, or whorls 2, 3 and 4) and the lemma
CC and palea (whorl 1), which are grass floral organs analogous to sepals.
CC May be involved in the control of flowering time. Seems to act as
CC transcriptional activator. May act upstream of the auxin-responsive
CC protein GH3.8. {ECO:0000269|PubMed:16146529}.
CC -!- SUBUNIT: May interact with the K-box of MADS6, MADS14 and MADS15.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- DEVELOPMENTAL STAGE: Expressed at early stage of flower development in
CC floral meristem, and at later stage in lemma, palea and carpel
CC primordia. {ECO:0000269|PubMed:16146529}.
CC -!- DISRUPTION PHENOTYPE: Homeotic transformation of lodicules, stamens and
CC carpels into lemma- and palea-like structures.
CC {ECO:0000269|PubMed:16146529}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM000128; EEC74760.1; -; Genomic_DNA.
DR EMBL; AY895163; AAX82498.1; -; Genomic_DNA.
DR AlphaFoldDB; A2XDY1; -.
DR SMR; A2XDY1; -.
DR STRING; 39946.A2XDY1; -.
DR EnsemblPlants; BGIOSGA011213-TA; BGIOSGA011213-PA; BGIOSGA011213.
DR Gramene; BGIOSGA011213-TA; BGIOSGA011213-PA; BGIOSGA011213.
DR HOGENOM; CLU_053053_0_2_1; -.
DR OMA; GFFPGWT; -.
DR Proteomes; UP000007015; Chromosome 3.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0010022; P:meristem determinacy; IEA:EnsemblPlants.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR GO; GO:0048509; P:regulation of meristem development; IEA:EnsemblPlants.
DR GO; GO:0010093; P:specification of floral organ identity; IEA:EnsemblPlants.
DR CDD; cd00265; MADS_MEF2_like; 1.
DR Gene3D; 3.40.1810.10; -; 1.
DR InterPro; IPR033896; MADS_MEF2-like.
DR InterPro; IPR002487; TF_Kbox.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR Pfam; PF01486; K-box; 1.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SSF55455; 1.
DR PROSITE; PS51297; K_BOX; 1.
DR PROSITE; PS00350; MADS_BOX_1; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 2: Evidence at transcript level;
KW Activator; Developmental protein; Differentiation; DNA-binding; Flowering;
KW Nucleus; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..257
FT /note="MADS-box transcription factor 1"
FT /id="PRO_0000296346"
FT DOMAIN 1..61
FT /note="MADS-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00251"
FT DOMAIN 85..175
FT /note="K-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00629"
SQ SEQUENCE 257 AA; 29528 MW; 70A3DAEED355A37C CRC64;
MGRGKVELKR IENKISRQVT FAKRRNGLLK KAYELSLLCD AEVALIIFSG RGRLFEFSSS
SCMYKTLERY RSCNYNSQDA AAPENEINYQ EYLKLKTRVE FLQTTQRNIL GEDLGPLSMK
ELEQLENQIE VSLKQIRSRK NQALLDQLFD LKSKEQQLQD LNKDLRKKLQ ETSAENVLHM
SWQDGGGHSG SSTVLADQPH HHQGLLHPHP DQGDHSLQIG YHHPHAHHHQ AYMDHLSNEA
ADMVAHHPNE HIPSGWI
