MADS3_VITVI
ID MADS3_VITVI Reviewed; 244 AA.
AC Q8LLR1;
DT 05-JUN-2019, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Agamous-like MADS-box protein MADS3 {ECO:0000305};
DE AltName: Full=Agamous-like protein 6 {ECO:0000305};
DE Short=VvAGL6 {ECO:0000303|PubMed:18997115};
DE Short=VviAGL6a {ECO:0000303|PubMed:26818751};
DE AltName: Full=MADS-box protein 3 {ECO:0000303|Ref.1};
DE Short=VvMADS3 {ECO:0000303|Ref.1};
GN Name=MADS3 {ECO:0000303|Ref.1};
GN OrderedLocusNames=VIT_15s0048g01270 {ECO:0000312|EMBL:CBI38823.3};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RC STRAIN=cv. Cabernet Sauvignon;
RX DOI=10.1016/S0168-9452(02)00034-1;
RA Boss P.K., Sensi E., Hua C., Davies C., Thomas M.R.;
RT "Cloning and characterization of grapevine (Vitis vinifera L.) MADS-box
RT genes expressed during inflorescence and berry development.";
RL Plant Sci. 162:887-895(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024;
RX PubMed=17721507; DOI=10.1038/nature06148;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
RN [3]
RP GENE FAMILY.
RX PubMed=18997115; DOI=10.1104/pp.108.131052;
RA Diaz-Riquelme J., Lijavetzky D., Martinez-Zapater J.M., Carmona M.J.;
RT "Genome-wide analysis of MIKCC-type MADS box genes in grapevine.";
RL Plant Physiol. 149:354-369(2009).
RN [4]
RP GENE FAMILY.
RX PubMed=26818751; DOI=10.1186/s12864-016-2398-7;
RA Grimplet J., Martinez-Zapater J.M., Carmona M.J.;
RT "Structural and functional annotation of the MADS-box transcription factor
RT family in grapevine.";
RL BMC Genomics 17:80-80(2016).
CC -!- FUNCTION: Probable transcription factor involved in flower development.
CC {ECO:0000250|UniProtKB:Q0HA25}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00251}.
CC -!- TISSUE SPECIFICITY: Expressed in flowers and seeds.
CC {ECO:0000269|Ref.1}.
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DR EMBL; AF373602; AAM21343.1; -; Genomic_DNA.
DR EMBL; AF373602; CBI38823.3; -; Genomic_DNA.
DR RefSeq; NP_001268111.1; NM_001281182.1.
DR AlphaFoldDB; Q8LLR1; -.
DR SMR; Q8LLR1; -.
DR STRING; 29760.VIT_15s0048g01270.t01; -.
DR EnsemblPlants; Vitvi15g00776_t001; Vitvi15g00776_P001; Vitvi15g00776.
DR GeneID; 100232868; -.
DR Gramene; Vitvi15g00776_t001; Vitvi15g00776_P001; Vitvi15g00776.
DR KEGG; vvi:100232868; -.
DR eggNOG; KOG0014; Eukaryota.
DR HOGENOM; CLU_053053_0_2_1; -.
DR InParanoid; Q8LLR1; -.
DR OMA; FQDLWAN; -.
DR OrthoDB; 1353656at2759; -.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0009908; P:flower development; IEA:UniProtKB-KW.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00265; MADS_MEF2_like; 1.
DR Gene3D; 3.40.1810.10; -; 1.
DR InterPro; IPR033896; MADS_MEF2-like.
DR InterPro; IPR002487; TF_Kbox.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR Pfam; PF01486; K-box; 1.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SSF55455; 1.
DR PROSITE; PS51297; K_BOX; 1.
DR PROSITE; PS00350; MADS_BOX_1; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Flowering; Nucleus; Transcription; Transcription regulation.
FT CHAIN 1..244
FT /note="Agamous-like MADS-box protein MADS3"
FT /id="PRO_0000447291"
FT DOMAIN 1..61
FT /note="MADS-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00251"
FT DOMAIN 85..175
FT /note="K-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00629"
FT REGION 180..206
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 180..201
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 244 AA; 27763 MW; 09F53E4704680060 CRC64;
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSA
GTTKTLERYQ RVCYTPQDNN MECETQSWYQ EVSKLKAKYE SLQRTQRHLL GEDLGPLSVK
ELQNLEKQLE GALAQARQRK TQMMIEQMED LRRKERQLGD LNKQLKLKLE AEGQSLKAIQ
GSWNPSTATA GNSSFPVHPS QSNPMDCEPE PILQIGYHHY VPAEGPSVSK SMAGESNFIQ
GWVL
