MADS4_SOLLC
ID MADS4_SOLLC Reviewed; 238 AA.
AC K4BND8;
DT 30-AUG-2017, integrated into UniProtKB/Swiss-Prot.
DT 28-NOV-2012, sequence version 1.
DT 03-AUG-2022, entry version 61.
DE RecName: Full=MADS-box protein 04g005320;
GN OrderedLocusNames=Solyc04g005320;
OS Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC Solanum subgen. Lycopersicon.
OX NCBI_TaxID=4081;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Heinz 1706;
RX PubMed=22660326; DOI=10.1038/nature11119;
RG Tomato Genome Consortium;
RT "The tomato genome sequence provides insights into fleshy fruit
RT evolution.";
RL Nature 485:635-641(2012).
RN [2]
RP FUNCTION.
RX PubMed=28528644; DOI=10.1016/j.cell.2017.04.032;
RA Soyk S., Lemmon Z.H., Oved M., Fisher J., Liberatore K.L., Park S.J.,
RA Goren A., Jiang K., Ramos A., van der Knaap E., Van Eck J., Zamir D.,
RA Eshed Y., Lippman Z.B.;
RT "Bypassing negative epistasis on yield in tomato imposed by a domestication
RT gene.";
RL Cell 0:0-0(2017).
CC -!- FUNCTION: Probable MADS-box transcription factor that functions with J2
CC and EJ2 in meristem maturation. {ECO:0000269|PubMed:28528644}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00251}.
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DR RefSeq; XP_004237061.1; XM_004237013.3.
DR AlphaFoldDB; K4BND8; -.
DR SMR; K4BND8; -.
DR STRING; 4081.Solyc04g005320.2.1; -.
DR PaxDb; K4BND8; -.
DR PRIDE; K4BND8; -.
DR EnsemblPlants; Solyc04g005320.3.1; Solyc04g005320.3.1; Solyc04g005320.3.
DR GeneID; 101253992; -.
DR Gramene; Solyc04g005320.3.1; Solyc04g005320.3.1; Solyc04g005320.3.
DR KEGG; sly:101253992; -.
DR eggNOG; KOG0014; Eukaryota.
DR HOGENOM; CLU_053053_0_2_1; -.
DR InParanoid; K4BND8; -.
DR OMA; SWETGEQ; -.
DR OrthoDB; 1247594at2759; -.
DR PhylomeDB; K4BND8; -.
DR Proteomes; UP000004994; Chromosome 4.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00265; MADS_MEF2_like; 1.
DR Gene3D; 3.40.1810.10; -; 1.
DR InterPro; IPR033896; MADS_MEF2-like.
DR InterPro; IPR002487; TF_Kbox.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR Pfam; PF01486; K-box; 1.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SSF55455; 1.
DR PROSITE; PS51297; K_BOX; 1.
DR PROSITE; PS00350; MADS_BOX_1; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 3: Inferred from homology;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..238
FT /note="MADS-box protein 04g005320"
FT /id="PRO_0000441034"
FT DOMAIN 1..61
FT /note="MADS-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00251"
FT DOMAIN 87..177
FT /note="K-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00629"
SQ SEQUENCE 238 AA; 27522 MW; 248B01733A38583A CRC64;
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSILCE AEVALIIFSN RGKLYEFCST
SSMSDTLERY HRCSYGDLET GQSSKDSQNN YQEYMKLKAR VEVLQQSQRH ILGEDLGQLN
TKDLEQLERQ LDSSLRLIRS RRTQNMLDQL SDLQQKEQSL LEINRSLKTK LEENSVAHWH
ITGEQNVQFR QQPAQSEGFF QPLQCNTNIV PNRYNVAPLD SIEPSTQNAT GILPGWML
