MASY_DICDI
ID MASY_DICDI Reviewed; 543 AA.
AC Q8T2K9; Q552X6;
DT 03-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 2.
DT 25-MAY-2022, entry version 99.
DE RecName: Full=Malate synthase;
DE EC=2.3.3.9;
GN Name=masA; ORFNames=DDB_G0275887;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=12097910; DOI=10.1038/nature00847;
RA Gloeckner G., Eichinger L., Szafranski K., Pachebat J.A., Bankier A.T.,
RA Dear P.H., Lehmann R., Baumgart C., Parra G., Abril J.F., Guigo R.,
RA Kumpf K., Tunggal B., Cox E.C., Quail M.A., Platzer M., Rosenthal A.,
RA Noegel A.A.;
RT "Sequence and analysis of chromosome 2 of Dictyostelium discoideum.";
RL Nature 418:79-85(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [3]
RP DEVELOPMENTAL STAGE.
RX PubMed=12796308; DOI=10.1128/ec.2.3.627-637.2003;
RA Maeda M., Sakamoto H., Iranfar N., Fuller D., Maruo T., Ogihara S.,
RA Morio T., Urushihara H., Tanaka Y., Loomis W.F.;
RT "Changing patterns of gene expression in Dictyostelium prestalk cell
RT subtypes recognized by in situ hybridization with genes from microarray
RT analyses.";
RL Eukaryot. Cell 2:627-637(2003).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=acetyl-CoA + glyoxylate + H2O = (S)-malate + CoA + H(+);
CC Xref=Rhea:RHEA:18181, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:15589, ChEBI:CHEBI:36655, ChEBI:CHEBI:57287,
CC ChEBI:CHEBI:57288; EC=2.3.3.9;
CC -!- PATHWAY: Carbohydrate metabolism; glyoxylate cycle; (S)-malate from
CC isocitrate: step 2/2.
CC -!- DEVELOPMENTAL STAGE: Late prestalk cell-specific expression.
CC {ECO:0000269|PubMed:12796308}.
CC -!- SIMILARITY: Belongs to the malate synthase family. {ECO:0000305}.
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DR EMBL; AAFI02000013; EAL69694.2; -; Genomic_DNA.
DR RefSeq; XP_643552.2; XM_638460.2.
DR AlphaFoldDB; Q8T2K9; -.
DR SMR; Q8T2K9; -.
DR STRING; 44689.DDB0230181; -.
DR PaxDb; Q8T2K9; -.
DR EnsemblProtists; EAL69694; EAL69694; DDB_G0275887.
DR GeneID; 8620134; -.
DR KEGG; ddi:DDB_G0275887; -.
DR dictyBase; DDB_G0275887; masA.
DR eggNOG; KOG1261; Eukaryota.
DR HOGENOM; CLU_018928_3_0_1; -.
DR InParanoid; Q8T2K9; -.
DR OMA; CHKRGAP; -.
DR PhylomeDB; Q8T2K9; -.
DR UniPathway; UPA00703; UER00720.
DR PRO; PR:Q8T2K9; -.
DR Proteomes; UP000002195; Chromosome 2.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005782; C:peroxisomal matrix; IBA:GO_Central.
DR GO; GO:0004474; F:malate synthase activity; IBA:GO_Central.
DR GO; GO:0006097; P:glyoxylate cycle; IBA:GO_Central.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-KW.
DR CDD; cd00727; malate_synt_A; 1.
DR Gene3D; 1.20.1220.12; -; 1.
DR Gene3D; 3.20.20.360; -; 1.
DR InterPro; IPR044856; Malate_synth_C_sf.
DR InterPro; IPR011076; Malate_synth_sf.
DR InterPro; IPR006252; Malate_synthA.
DR InterPro; IPR001465; Malate_synthase.
DR InterPro; IPR019830; Malate_synthase_CS.
DR InterPro; IPR046363; MS_N_TIM-barrel_dom.
DR PANTHER; PTHR42902; PTHR42902; 1.
DR Pfam; PF01274; Malate_synthase; 1.
DR PIRSF; PIRSF001363; Malate_synth; 1.
DR SUPFAM; SSF51645; SSF51645; 1.
DR TIGRFAMs; TIGR01344; malate_syn_A; 1.
DR PROSITE; PS00510; MALATE_SYNTHASE; 1.
PE 2: Evidence at transcript level;
KW Glyoxylate bypass; Reference proteome; Transferase;
KW Tricarboxylic acid cycle.
FT CHAIN 1..543
FT /note="Malate synthase"
FT /id="PRO_0000365606"
FT ACT_SITE 162
FT /note="Proton acceptor"
FT /evidence="ECO:0000250"
FT ACT_SITE 449
FT /note="Proton donor"
FT /evidence="ECO:0000250"
SQ SEQUENCE 543 AA; 62030 MW; 6F8E37DCCC9904B2 CRC64;
MLRGIEIRGK VDKNVKSILT EECLTFLGEL ERRFGGIRKN LLQKRLDRQI DINNGILPSF
LKDSDCKRAT DKNWKCSSVP LEIQDRRVEI TGPTDRKMVI NALNSGAKVF MADFEDANCP
NWENSIHGQQ NMIDANNRTI SFTSAEGRKY ELNKQVAVLF VRPRGWHLNE DHLAIDGLSM
SGSLFDFGCY IFHNHQILKN RNSNPYFYLP KMESHLEARL WNDVFVFSQN YLGMPIGTIK
ATVLIETILA SFEMDEILYE LRDHSAGLNC GRWDYIFSFI KKFQSYPDKM LPDRAKVTMT
SPFMDSYVKL LIYTCHKRGV HAMGGMAAQI PIKNNEQANN AAMEKVRLDK QREVRAGHDG
TWVAHPALIP IAMEQFNTHM KSQNQISYIP SSTAPNFEEI AKSLLSVDPV KPGDITEDGF
RSNIVVGILY LEAWLNGNGC VPIHNLMEDA ATAEISRSQI WQWIKHKAPL PDGKSFVTLQ
YYNRIFKEES DKLEKAHPNS KTLTDAIQIF NNLIVSPNFI DFLTPSCYKF VVDSERKTFS
PKL