MCC05_ARATH
ID MCC05_ARATH Reviewed; 297 AA.
AC Q9SHT2;
DT 11-JUN-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=MATH domain and coiled-coil domain-containing protein At2g05420;
DE AltName: Full=RTM3-like protein At2g05420;
GN OrderedLocusNames=At2g05420; ORFNames=F16J10.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=20584941; DOI=10.1104/pp.110.155754;
RA Cosson P., Sofer L., Le Q.H., Leger V., Schurdi-Levraud V., Whitham S.A.,
RA Yamamoto M.L., Gopalan S., Le Gall O., Candresse T., Carrington J.C.,
RA Revers F.;
RT "RTM3, which controls long-distance movement of potyviruses, is a member of
RT a new plant gene family encoding a meprin and TRAF homology domain-
RT containing protein.";
RL Plant Physiol. 154:222-232(2010).
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DR EMBL; AC007289; AAD32895.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC05928.1; -; Genomic_DNA.
DR PIR; C84468; C84468.
DR RefSeq; NP_178610.1; NM_126565.2.
DR AlphaFoldDB; Q9SHT2; -.
DR SMR; Q9SHT2; -.
DR STRING; 3702.AT2G05420.1; -.
DR PaxDb; Q9SHT2; -.
DR PRIDE; Q9SHT2; -.
DR ProteomicsDB; 238878; -.
DR EnsemblPlants; AT2G05420.1; AT2G05420.1; AT2G05420.
DR GeneID; 815090; -.
DR Gramene; AT2G05420.1; AT2G05420.1; AT2G05420.
DR KEGG; ath:AT2G05420; -.
DR Araport; AT2G05420; -.
DR TAIR; locus:2042783; AT2G05420.
DR eggNOG; KOG1987; Eukaryota.
DR HOGENOM; CLU_026537_0_0_1; -.
DR InParanoid; Q9SHT2; -.
DR OMA; ITWVIKT; -.
DR OrthoDB; 128089at2759; -.
DR PhylomeDB; Q9SHT2; -.
DR PRO; PR:Q9SHT2; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9SHT2; differential.
DR CDD; cd00121; MATH; 1.
DR Gene3D; 2.60.210.10; -; 1.
DR InterPro; IPR002083; MATH/TRAF_dom.
DR InterPro; IPR008974; TRAF-like.
DR Pfam; PF00917; MATH; 1.
DR SMART; SM00061; MATH; 1.
DR PROSITE; PS50144; MATH; 1.
PE 4: Predicted;
KW Coiled coil; Reference proteome.
FT CHAIN 1..297
FT /note="MATH domain and coiled-coil domain-containing
FT protein At2g05420"
FT /id="PRO_0000429282"
FT DOMAIN 7..139
FT /note="MATH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00129"
FT COILED 239..281
FT /evidence="ECO:0000255"
SQ SEQUENCE 297 AA; 33643 MW; 9305B5184253D58C CRC64;
MGKQVDSKTI TWVIENFSSL QSASIHSDQF VVGDCKWRLK AYPKGNEKAT YLAYRANNLA
LYLNVANSKS FPIGWTRHTK FSLTLVNQKS EKLSKLTESQ HWFDHKSTSR GFPAMIPLTN
LHTNEGFLVN GELTLVAKVE VLEVVGKLDV SKKSSPVMET IDVNGFQVLP QIESVNRLFA
KHLDIASKFR PKKPYMKTAY MNVLLSLTKT LCQSPQDLSN DDISGAGAAL TYLREAGFKL
DWLEKKHGEI KEKKKKEEAS LKRLQEMEKQ IFNEAQIYKE KVLAARAPLS LNEDNVF