MCP_HHV6Z
ID MCP_HHV6Z Reviewed; 1345 AA.
AC Q9QJ26;
DT 03-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 02-DEC-2020, entry version 51.
DE RecName: Full=Major capsid protein {ECO:0000255|HAMAP-Rule:MF_04016};
DE Short=MCP {ECO:0000255|HAMAP-Rule:MF_04016};
GN Name=MCP {ECO:0000255|HAMAP-Rule:MF_04016}; Synonyms=U57;
OS Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic
OS virus).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Betaherpesvirinae; Roseolovirus.
OX NCBI_TaxID=36351;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Z29;
RX PubMed=10482553; DOI=10.1128/jvi.73.10.8040-8052.1999;
RA Dominguez G., Dambaugh T.R., Stamey F.R., Dewhurst S., Inoue N.,
RA Pellett P.E.;
RT "Human herpesvirus 6B genome sequence: coding content and comparison with
RT human herpesvirus 6A.";
RL J. Virol. 73:8040-8052(1999).
CC -!- FUNCTION: Self-assembles to form an icosahedral capsid with a T=16
CC symmetry, about 200 nm in diameter, and consisting of 150 hexons and 12
CC pentons (total of 162 capsomers). Hexons form the edges and faces of
CC the capsid and are each composed of six MCP molecules. In contrast, one
CC penton is found at each of the 12 vertices. Eleven of the pentons are
CC MCP pentamers, while the last vertex is occupied by the portal complex.
CC The capsid is surrounded by a layer of proteinaceous material
CC designated the tegument which, in turn, is enclosed in an envelope of
CC host cell-derived lipids containing virus-encoded glycoproteins.
CC {ECO:0000255|HAMAP-Rule:MF_04016}.
CC -!- SUBUNIT: Homomultimer. Makes the hexons and eleven out of twelve
CC pentons. Interacts with triplex proteins 1/TRX1 and 2/TRX2; adjacent
CC capsomers are linked together in groups of three by triplexes,
CC heterotrimeric complexes composed of one molecule of TRX1 and two
CC molecules of TRX2. Interacts with scaffold protein; this interaction
CC allows efficient MCP transport to the host nucleus. Interacts with
CC capsid vertex component 2/CVC2. Interacts with the small capsomere-
CC interacting protein/SCP. {ECO:0000255|HAMAP-Rule:MF_04016}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000255|HAMAP-Rule:MF_04016}. Host
CC nucleus {ECO:0000255|HAMAP-Rule:MF_04016}.
CC -!- SIMILARITY: Belongs to the herpesviridae major capsid protein family.
CC {ECO:0000255|HAMAP-Rule:MF_04016}.
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DR EMBL; AF157706; AAD49660.1; -; Genomic_DNA.
DR RefSeq; NP_050238.1; NC_000898.1.
DR PDB; 6Q1F; EM; 9.00 A; A/B/C/D/E/F/G/H/I/q/r/s/t/u/v/w=1-1345.
DR PDBsum; 6Q1F; -.
DR SMR; Q9QJ26; -.
DR PRIDE; Q9QJ26; -.
DR GeneID; 1497059; -.
DR KEGG; vg:1497059; -.
DR Proteomes; UP000006930; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0039622; C:T=16 icosahedral viral capsid; IEA:UniProtKB-UniRule.
DR GO; GO:0005198; F:structural molecule activity; IEA:UniProtKB-UniRule.
DR HAMAP; MF_04016; HSV_MCP; 1.
DR InterPro; IPR000912; Herpes_MCP.
DR InterPro; IPR023233; Herpes_MCP_upper_sf.
DR Pfam; PF03122; Herpes_MCP; 1.
DR PRINTS; PR00235; HSVCAPSIDMCP.
DR SUPFAM; SSF103417; SSF103417; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Capsid protein; Host nucleus; Reference proteome;
KW T=16 icosahedral capsid protein; Virion.
FT CHAIN 1..1345
FT /note="Major capsid protein"
FT /id="PRO_0000408407"
SQ SEQUENCE 1345 AA; 152107 MW; 80746387AFC2A573 CRC64;
MENWQATEIL PKIEAPLNIF NDIKTYTAEQ LFDNLRIYFG DDPSRYNISF EALLGIYCNK
IEWINFFTTP IAVAANVIRF NDVSRMTLGK VLFFIQLPRV ATGNDVTAPK ETTIMVAKHS
EKHPINISFD LSAACLEHLE NTFKNTVIDQ ILNINALHTV LRSLKNSADS LERGLIHAFM
QTLLRKSPPQ FIVLTMNENK VHNKQALSRV QRSNMFQSLK NRLLTSLFFL NRNNNSSYIY
RILNDMMESV TESILNDTNN YTSKENIPLD GVLLGPIGSI QKLTNILSQY ISTQVVSAPI
SYGHFIMGKE NAVTAIAYRA IMADFTQFTV NAGTEQQDTN NKSEIFDKSR AYADLKLNTL
KLGDKLVAFD HLHKVYKNTD VNDPLEQSLQ LTFFFPLGIY IPTETGFSTM ETRVKLNDTM
ENNLPTSVFF HNKDQVVQRI DFADILPSVC HPIVHDSTIV ERLMKNEPLP TGHRFSQLCQ
LKITRENPTR ILQTLYNLYE SRQEVPKNTN VLKNELNVED FYKPDNPTLP TERHPFFDLT
YIQKNRATEV LCTPRIMIGN MPLPLAPISF HEARTNQMLE HAKTNSHNYD FTLKIVTESL
TSGSYPELAY VIEILVHGNK HAFMILKQVI SQCISYWFNM KHILLFCNSF EMIMLISNHM
GDELIPGAAF AHYRNLVSLI RLVKRTISIS NINEQLCGEP LVNFANALFD GRLFCPFVHT
MPRNDTNAKI TADDTPLTQN TVRVRNYEIS DVQRMNLIDS SVVFTDNDRP SNENTILSKI
FYFCVLPALS NNKACGAGVN VKELVLDLFY TEPFICPDDC FQENPISSDV LMSLIREAMG
PGYTVANTSS IAKQLFKSLI YINENTKILE VEVSLDPAQR HGNSVHFQSL QHILYNGLCL
ISPITTLRRY YQPIPFHRFF SDPGICGTMN ADIQVFLNTF PHYQRNDGGF PLPPPLALEF
YNWQRTPFSV YSAFCPNSLL SIMTLAAMHS KLSPVAIAIQ SKSKIHPGFA ATLVRTDNFD
VECLLYSSRA ATSIILDDPT VTAEAKDIVT TYNFTQHLSF VDMGLGFSST TATANLKRIK
SDMGSKIQNL FSAFPIHAFT NTDINTWIRH HVGIEKPNPS EGEALNIITF GGINKNPPSI
LLHGQQAICE VILTPVTTNI NFFKLPHNPR GRESCMMGTD PHNEEAARKA LYDHTQTDSD
TFAATTNPWA SLPGSLGDIL YNTAHREQLC YNPKTYSPNA QFFTESDILK TNKMMYKVIN
EYCMKSNSCL NSDSEIQYSC SEGTDSFVSR PCQFLQNALP LHCSSNQALL ESRSKTGNTQ
ISETHYCNYA IGETIPLQLI IESSI