MCP_IIV6
ID MCP_IIV6 Reviewed; 467 AA.
AC Q05815;
DT 01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2002, sequence version 2.
DT 23-FEB-2022, entry version 87.
DE RecName: Full=Major capsid protein;
DE Short=MCP;
DE AltName: Full=P50;
GN Name=MCP; ORFNames=IIV-6 274L;
OS Invertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes;
OC Pimascovirales; Iridoviridae; Betairidovirinae; Iridovirus.
OX NCBI_TaxID=176652;
OH NCBI_TaxID=6997; Acheta domesticus (House cricket).
OH NCBI_TaxID=168631; Chilo suppressalis (Asiatic rice borer moth).
OH NCBI_TaxID=6999; Gryllus bimaculatus (Two-spotted cricket).
OH NCBI_TaxID=58607; Gryllus campestris.
OH NCBI_TaxID=7108; Spodoptera frugiperda (Fall armyworm).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8492091; DOI=10.1099/0022-1317-74-5-873;
RA Stohwasser R., Raab K., Schnitzler P., Janssen W., Darai G.;
RT "Identification of the gene encoding the major capsid protein of insect
RT iridescent virus type 6 by polymerase chain reaction.";
RL J. Gen. Virol. 74:873-879(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=11448171; DOI=10.1006/viro.2001.0963;
RA Jakob N.J., Mueller K., Bahr U., Darai G.;
RT "Analysis of the first complete DNA sequence of an invertebrate iridovirus:
RT coding strategy of the genome of Chilo iridescent virus.";
RL Virology 286:182-196(2001).
RN [3]
RP GENOME REANNOTATION.
RX PubMed=17239238; DOI=10.1186/1743-422x-4-11;
RA Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.;
RT "Comparative genomic analysis of the family Iridoviridae: re-annotating and
RT defining the core set of iridovirus genes.";
RL Virol. J. 4:11-11(2007).
RN [4]
RP STRUCTURE BY ELECTRON MICROSCOPY OF THE CAPSID.
RX PubMed=19027752; DOI=10.1016/j.jmb.2008.11.002;
RA Yan X., Yu Z., Zhang P., Battisti A.J., Holdaway H.A., Chipman P.R.,
RA Bajaj C., Bergoin M., Rossmann M.G., Baker T.S.;
RT "The capsid proteins of a large, icosahedral dsDNA virus.";
RL J. Mol. Biol. 385:1287-1299(2009).
CC -!- FUNCTION: Major capsid protein that self assembles to form an
CC icosahedral capsid with a T=147 symmetry. Represents around 50% of the
CC total virion protein mass.
CC -!- SUBUNIT: Homotrimer. {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the NCLDV major capsid protein family.
CC {ECO:0000305}.
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DR EMBL; AF303741; AAK82135.1; -; Genomic_DNA.
DR PIR; JQ2215; JQ2215.
DR RefSeq; NP_149737.1; NC_003038.1.
DR SMR; Q05815; -.
DR GeneID; 1733341; -.
DR KEGG; vg:1733341; -.
DR Proteomes; UP000001359; Genome.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.70.9.20; -; 1.
DR InterPro; IPR031654; Capsid_N.
DR InterPro; IPR007542; MCP_C.
DR InterPro; IPR038519; MCP_C_sf.
DR InterPro; IPR016112; VP_dsDNA_II.
DR Pfam; PF16903; Capsid_N; 1.
DR Pfam; PF04451; Capsid_NCLDV; 1.
DR SUPFAM; SSF49749; SSF49749; 2.
PE 1: Evidence at protein level;
KW Capsid protein; Late protein; Reference proteome; Virion.
FT CHAIN 1..467
FT /note="Major capsid protein"
FT /id="PRO_0000222381"
FT CONFLICT 328
FT /note="S -> Y (in Ref. 1)"
FT /evidence="ECO:0000305"
FT CONFLICT 331
FT /note="I -> L (in Ref. 1)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 467 AA; 51322 MW; 5A81E1E79D3B41A6 CRC64;
MSISSSNVTS GFIDIATKDE IEKYMYGGKT STAYFVRETR KATWFTQVPV SLTRANGSAN
FGSEWSASIS RAGDYLLYTW LRVRIPSVTL LSTNQFGANG RIRWCRNFMH NLIRECSITF
NDLVAARFDH YHLDFWAAFT TPASKAVGYD NMIGNVSALI QPQPVPVAPA TVSLPEADLN
LPLPFFFSRD SGVALPTAAL PYNEMRINFQ FHDWQRLLIL DNIAAVASQT VVPVVGATSD
IATAPVLHHG TVWGNYAIVS NEERRRMGCS VRDILVEQVQ TAPRHVWNPT TNDAPNYDIR
FSHAIKALFF AVRNTTFSNQ PSNYTTASPV ITSTTVILEP STGAFDPIHH TTLIYENTNR
LNHMGSDYFS LVNPWYHAPT IPGLTGFHEY SYSLAFNEID PMGSTNYGKL TNISIVPTAS
PAAKVGAAGT GPAGSGQNFP QTFEFIVTAL NNNIIRISGG ALGFPVL