MCP_PBCV1
ID MCP_PBCV1 Reviewed; 437 AA.
AC P30328;
DT 01-APR-1993, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 29-SEP-2021, entry version 108.
DE RecName: Full=Major capsid protein;
DE Short=MCP;
DE AltName: Full=VP54;
GN OrderedLocusNames=A430L;
OS Paramecium bursaria Chlorella virus 1 (PBCV-1).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes;
OC Algavirales; Phycodnaviridae; Chlorovirus.
OX NCBI_TaxID=10506;
OH NCBI_TaxID=114055; Chlorella.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PARTIAL PROTEIN SEQUENCE.
RX PubMed=1566573; DOI=10.1016/0042-6822(92)90750-j;
RA Graves M.V., Meints R.H.;
RT "Characterization of the major capsid protein and cloning of its gene from
RT algal virus PBCV-1.";
RL Virology 188:198-207(1992).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=8806566; DOI=10.1006/viro.1996.0482;
RA Kutish G.F., Li Y., Lu Z., Furuta M., Rock D.L., van Etten J.L.;
RT "Analysis of 76 kb of the chlorella virus PBCV-1 330-kb genome: map
RT positions 182 to 258.";
RL Virology 223:303-317(1996).
CC -!- SUBUNIT: Homodimer.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the NCLDV major capsid protein family.
CC {ECO:0000305}.
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DR EMBL; M85052; AAA88828.1; -; Genomic_DNA.
DR EMBL; JF411744; AAC96798.1; -; Genomic_DNA.
DR PIR; A40245; VCXECV.
DR RefSeq; NP_048787.1; NC_000852.5.
DR PDB; 1M4X; EM; 28.00 A; A/B/C=25-437.
DR PDB; 3KK5; EM; -; A/B/C/D/E/F/G/H/I/J/K/L/M=1-437.
DR PDB; 5TIP; X-ray; 2.00 A; A/B/C/D=2-437.
DR PDB; 5TIQ; X-ray; 2.54 A; A/B=2-437.
DR PDB; 6NCL; EM; 3.50 A; d0/d1/d2/d3/d4/d5/d6/d7/d8/d9/e0/e1/e2/e3/e4/e5/e6/e7/e8/e9/f0/f1/f2/f3/f4/f5/f6/f7/f8/f9=1-437.
DR PDBsum; 1M4X; -.
DR PDBsum; 3KK5; -.
DR PDBsum; 5TIP; -.
DR PDBsum; 5TIQ; -.
DR PDBsum; 6NCL; -.
DR SMR; P30328; -.
DR GeneID; 917865; -.
DR KEGG; vg:917865; -.
DR EvolutionaryTrace; P30328; -.
DR Proteomes; UP000000862; Genome.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.70.9.20; -; 1.
DR InterPro; IPR031654; Capsid_N.
DR InterPro; IPR007542; MCP_C.
DR InterPro; IPR038519; MCP_C_sf.
DR InterPro; IPR016112; VP_dsDNA_II.
DR Pfam; PF16903; Capsid_N; 1.
DR Pfam; PF04451; Capsid_NCLDV; 1.
DR SUPFAM; SSF49749; SSF49749; 2.
PE 1: Evidence at protein level;
KW 3D-structure; Capsid protein; Direct protein sequencing; Late protein;
KW Reference proteome; Virion.
FT INIT_MET 1
FT /note="Removed; by host"
FT CHAIN 2..437
FT /note="Major capsid protein"
FT /id="PRO_0000222990"
FT REGION 2..31
FT /note="Hydrophobic"
FT HELIX 4..9
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 13..15
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 16..19
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 37..43
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 55..59
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 64..77
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 88..92
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 93..100
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 103..109
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 110..120
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 123..133
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 144..150
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 154..157
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 159..161
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 165..167
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 173..179
FT /evidence="ECO:0007829|PDB:5TIP"
FT TURN 184..186
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 187..189
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 201..211
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 213..221
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 224..232
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 243..245
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 248..252
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 257..267
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 284..286
FT /evidence="ECO:0007829|PDB:5TIP"
FT TURN 287..289
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 300..302
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 308..310
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 313..320
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 323..326
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 331..342
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 351..358
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 362..364
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 371..373
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 377..383
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 385..388
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 393..396
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 403..405
FT /evidence="ECO:0007829|PDB:5TIP"
FT HELIX 406..410
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 413..427
FT /evidence="ECO:0007829|PDB:5TIP"
FT STRAND 430..434
FT /evidence="ECO:0007829|PDB:5TIP"
SQ SEQUENCE 437 AA; 48165 MW; 97508AB2500F3A34 CRC64;
MAGGLSQLVA YGAQDVYLTG NPQITFFKTV YRRYTNFAIE SIQQTINGSV GFGNKVSTQI
SRNGDLITDI VVEFVLTKGG NGGTTYYPAE ELLQDVELEI GGQRIDKHYN DWFRTYDALF
RMNDDRYNYR RMTDWVNNEL VGAQKRFYVP LIFFFNQTPG LALPLIALQY HEVKLYFTLA
SQVQGVNYNG SSAIAGAAQP TMSVWVDYIF LDTQERTRFA QLPHEYLIEQ LQFTGSETAT
PSATTQASQN IRLNFNHPTK YLAWNFNNPT NYGQYTALAN IPGACSGAGT AAATVTTPDY
GNTGTYNEQL AVLDSAKIQL NGQDRFATRK GSYFNKVQPY QSIGGVTPAG VYLYSFALKP
AGRQPSGTCN FSRIDNATLS LTYKTCSIDA TSPAAVLGNT ETVTANTATL LTALNIYAKN
YNVLRIMSGM GGLAYAN
