MD19B_DANRE
ID MD19B_DANRE Reviewed; 240 AA.
AC Q6DRL8; Q568S3;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 89.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 19-B;
DE AltName: Full=Mediator complex subunit 19-B;
GN Name=med19b; Synonyms=med19; ORFNames=zgc:110121;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RX PubMed=15256591; DOI=10.1073/pnas.0403929101;
RA Amsterdam A., Nissen R.M., Sun Z., Swindell E.C., Farrington S.,
RA Hopkins N.;
RT "Identification of 315 genes essential for early zebrafish development.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:12792-12797(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=AB; TISSUE=Embryo;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the Mediator complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 19 family.
CC {ECO:0000305}.
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DR EMBL; AY648741; AAT68059.1; -; mRNA.
DR EMBL; BC092743; AAH92743.1; -; mRNA.
DR RefSeq; NP_001003416.2; NM_001003416.2.
DR AlphaFoldDB; Q6DRL8; -.
DR SMR; Q6DRL8; -.
DR STRING; 7955.ENSDARP00000116331; -.
DR Ensembl; ENSDART00000003022; ENSDARP00000016407; ENSDARG00000009472.
DR GeneID; 445021; -.
DR KEGG; dre:445021; -.
DR CTD; 445021; -.
DR ZFIN; ZDB-GENE-040727-4; med19b.
DR eggNOG; KOG4043; Eukaryota.
DR GeneTree; ENSGT00390000001774; -.
DR HOGENOM; CLU_098332_0_0_1; -.
DR InParanoid; Q6DRL8; -.
DR OrthoDB; 1484317at2759; -.
DR PhylomeDB; Q6DRL8; -.
DR PRO; PR:Q6DRL8; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 1.
DR Bgee; ENSDARG00000009472; Expressed in mature ovarian follicle and 21 other tissues.
DR ExpressionAtlas; Q6DRL8; baseline and differential.
DR GO; GO:0016592; C:mediator complex; IBA:GO_Central.
DR GO; GO:0003712; F:transcription coregulator activity; IEA:InterPro.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR019403; Mediator_Med19_met.
DR PANTHER; PTHR22536; PTHR22536; 1.
DR Pfam; PF10278; Med19; 1.
PE 2: Evidence at transcript level;
KW Activator; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..240
FT /note="Mediator of RNA polymerase II transcription subunit
FT 19-B"
FT /id="PRO_0000304768"
FT REGION 1..29
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 168..240
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 181..201
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 202..223
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 151
FT /note="L -> S (in Ref. 2; AAH92743)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 240 AA; 27005 MW; 834D452DAB26F574 CRC64;
MTEIFSSLYG QPDSQGPAGP SALGFGSGKP QVPQNMGPMC FPHQMMEEGA PVRKPAAMNE
PFYLLRELPM ENELTGHTNL ITHYNLEHAY NKFCGKKVKE KLSNFLPELP GMIDSPGIQD
NSSLRSLIEK PPVCNNSFSP LTGAMLTGFR LHTGPLPEQY RLMHIQPPKK KNKHKHKHHR
PQDPLPPETP SDSDHKKKKK KKDDDPDRKK KKKDKKKKKN RHSPDHPGMT GAQPSTSSLR