MDHG_SOYBN
ID MDHG_SOYBN Reviewed; 353 AA.
AC P37228;
DT 01-OCT-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1996, sequence version 2.
DT 03-AUG-2022, entry version 116.
DE RecName: Full=Malate dehydrogenase, glyoxysomal;
DE EC=1.1.1.37;
DE Flags: Precursor;
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 4-353.
RC STRAIN=cv. Maple Arrow; TISSUE=Cotyledon;
RX PubMed=8547819; DOI=10.1007/bf00202659;
RA Guex N., Henry H., Flach J., Richter H., Widmer F.;
RT "Glyoxysomal malate dehydrogenase and malate synthase from soybean
RT cotyledons (Glycine max L.): enzyme association, antibody production and
RT cDNA cloning.";
RL Planta 197:369-375(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 1-3.
RC STRAIN=cv. Maple Arrow; TISSUE=Cotyledon;
RA Richter H., Guex N.;
RL Submitted (JAN-1996) to UniProtKB.
RN [3]
RP 3D-STRUCTURE MODELING.
RA Guex N., Widmer F., Gaillard P., Carrupt P.-A.;
RT "3D modeling of soybean glyoxysomal malate dehydrogenase (gMDH).";
RL (In) Wermuth C.G. (eds.);
RL Trends in QSAR and molecular modelling 92, pp.485-486, Escom Science
RL Publishers, Leiden (1993).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(S)-malate + NAD(+) = H(+) + NADH + oxaloacetate;
CC Xref=Rhea:RHEA:21432, ChEBI:CHEBI:15378, ChEBI:CHEBI:15589,
CC ChEBI:CHEBI:16452, ChEBI:CHEBI:57540, ChEBI:CHEBI:57945; EC=1.1.1.37;
CC Evidence={ECO:0000255|PROSITE-ProRule:PRU10004};
CC -!- SUBUNIT: Homodimer.
CC -!- SUBCELLULAR LOCATION: Glyoxysome.
CC -!- SIMILARITY: Belongs to the LDH/MDH superfamily. MDH type 1 family.
CC {ECO:0000305}.
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DR EMBL; L01628; AAC37464.1; -; mRNA.
DR AlphaFoldDB; P37228; -.
DR SMR; P37228; -.
DR STRING; 3847.GLYMA11G04720.1; -.
DR PRIDE; P37228; -.
DR eggNOG; KOG1494; Eukaryota.
DR Proteomes; UP000008827; Unplaced.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0009514; C:glyoxysome; IEA:UniProtKB-SubCell.
DR GO; GO:0030060; F:L-malate dehydrogenase activity; IBA:GO_Central.
DR GO; GO:0006097; P:glyoxylate cycle; IEA:UniProtKB-KW.
DR GO; GO:0006108; P:malate metabolic process; IEA:InterPro.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-KW.
DR CDD; cd01337; MDH_glyoxysomal_mitochondrial; 1.
DR Gene3D; 3.90.110.10; -; 1.
DR InterPro; IPR001557; L-lactate/malate_DH.
DR InterPro; IPR022383; Lactate/malate_DH_C.
DR InterPro; IPR001236; Lactate/malate_DH_N.
DR InterPro; IPR015955; Lactate_DH/Glyco_Ohase_4_C.
DR InterPro; IPR001252; Malate_DH_AS.
DR InterPro; IPR010097; Malate_DH_type1.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR Pfam; PF02866; Ldh_1_C; 1.
DR Pfam; PF00056; Ldh_1_N; 1.
DR PIRSF; PIRSF000102; Lac_mal_DH; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
DR SUPFAM; SSF56327; SSF56327; 1.
DR TIGRFAMs; TIGR01772; MDH_euk_gproteo; 1.
DR PROSITE; PS00068; MDH; 1.
PE 2: Evidence at transcript level;
KW Glyoxylate bypass; Glyoxysome; NAD; Oxidoreductase; Peroxisome;
KW Reference proteome; Transit peptide; Tricarboxylic acid cycle.
FT TRANSIT 1..33
FT /note="Glyoxysome"
FT /evidence="ECO:0000255"
FT CHAIN 34..353
FT /note="Malate dehydrogenase, glyoxysomal"
FT /id="PRO_0000018641"
FT ACT_SITE 217
FT /note="Proton acceptor"
FT /evidence="ECO:0000250"
FT BINDING 48..54
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 74
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 121
FT /ligand="substrate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10004"
FT BINDING 127
FT /ligand="substrate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10004"
FT BINDING 134
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 157..159
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
FT BINDING 159
FT /ligand="substrate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10004"
FT BINDING 193
FT /ligand="substrate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10004"
FT BINDING 268
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250"
SQ SEQUENCE 353 AA; 37395 MW; D2B0BF1AE6CC8925 CRC64;
MEANSGASDR ISRIAGHLRP QREDDVCLKR SDCRAKGGVS GFKVAILGAA GGIGQPLAML
MKMNPLVSLL HLYDVVNTPG VTSDISHMDT GAVVRGFLGQ QQLEDALIGM DLVIIPAGVP
RKPGMTRDDL FNINAGIVKT LCEAIAKCCP KAIVNVISNP VNSTVPIAAE VFKRAGTYDP
KRLLGVTMLD VVRANTFVAE VLGVDPRDVD VPVVGGHAGI TILPLLSQIK PPCSFTPKEI
EYLTGRIQNG GPEVVEAKAG AGSATLSMAY AAVKFADACL HALRGDAGII ECAYVASQVT
ELPFFASKVR LGRVGVEEIL PLGPLNDYER ESLEKAKKEL AASIEKGISF IRK