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MEC_MYCTU
ID   MEC_MYCTU               Reviewed;         146 AA.
AC   P9WHS1; L0T6J9; P64813; Q10645;
DT   16-APR-2014, integrated into UniProtKB/Swiss-Prot.
DT   16-APR-2014, sequence version 1.
DT   03-AUG-2022, entry version 45.
DE   RecName: Full=CysO-cysteine peptidase;
DE            EC=3.13.1.6 {ECO:0000269|PubMed:16104727};
DE   AltName: Full=Metallocarboxypeptidase Mec;
GN   Name=mec; Synonyms=mec+; OrderedLocusNames=Rv1334; ORFNames=MTCY130.19;
OS   Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv).
OC   Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC   Mycobacterium; Mycobacterium tuberculosis complex.
OX   NCBI_TaxID=83332;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=9634230; DOI=10.1038/31159;
RA   Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.M., Harris D.E.,
RA   Gordon S.V., Eiglmeier K., Gas S., Barry C.E. III, Tekaia F., Badcock K.,
RA   Basham D., Brown D., Chillingworth T., Connor R., Davies R.M., Devlin K.,
RA   Feltwell T., Gentles S., Hamlin N., Holroyd S., Hornsby T., Jagels K.,
RA   Krogh A., McLean J., Moule S., Murphy L.D., Oliver S., Osborne J.,
RA   Quail M.A., Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton S.,
RA   Squares S., Squares R., Sulston J.E., Taylor K., Whitehead S.,
RA   Barrell B.G.;
RT   "Deciphering the biology of Mycobacterium tuberculosis from the complete
RT   genome sequence.";
RL   Nature 393:537-544(1998).
RN   [2]
RP   INDUCTION.
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=12123450; DOI=10.1046/j.1365-2958.2002.03005.x;
RA   Manganelli R., Voskuil M.I., Schoolnik G.K., Dubnau E., Gomez M., Smith I.;
RT   "Role of the extracytoplasmic-function sigma factor sigma(H) in
RT   Mycobacterium tuberculosis global gene expression.";
RL   Mol. Microbiol. 45:365-374(2002).
RN   [3]
RP   FUNCTION, CATALYTIC ACTIVITY, COFACTOR, AND ACTIVITY REGULATION.
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=16104727; DOI=10.1021/ja053476x;
RA   Burns K.E., Baumgart S., Dorrestein P.C., Zhai H., McLafferty F.W.,
RA   Begley T.P.;
RT   "Reconstitution of a new cysteine biosynthetic pathway in Mycobacterium
RT   tuberculosis.";
RL   J. Am. Chem. Soc. 127:11602-11603(2005).
RN   [4]
RP   DISRUPTION PHENOTYPE.
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=15928073; DOI=10.1073/pnas.0503272102;
RA   Rengarajan J., Bloom B.R., Rubin E.J.;
RT   "Genome-wide requirements for Mycobacterium tuberculosis adaptation and
RT   survival in macrophages.";
RL   Proc. Natl. Acad. Sci. U.S.A. 102:8327-8332(2005).
RN   [5]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=21969609; DOI=10.1074/mcp.m111.011627;
RA   Kelkar D.S., Kumar D., Kumar P., Balakrishnan L., Muthusamy B., Yadav A.K.,
RA   Shrivastava P., Marimuthu A., Anand S., Sundaram H., Kingsbury R.,
RA   Harsha H.C., Nair B., Prasad T.S., Chauhan D.S., Katoch K., Katoch V.M.,
RA   Kumar P., Chaerkady R., Ramachandran S., Dash D., Pandey A.;
RT   "Proteogenomic analysis of Mycobacterium tuberculosis by high resolution
RT   mass spectrometry.";
RL   Mol. Cell. Proteomics 10:M111.011627-M111.011627(2011).
CC   -!- FUNCTION: Protease that hydrolyzes the covalent CysO-cysteine adduct
CC       synthesized by CysM to release L-cysteine and regenerate CysO.
CC       {ECO:0000269|PubMed:16104727}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=[CysO sulfur-carrier protein]-Gly-NH-CH2-C(O)-S-L-Cys + H2O =
CC         [CysO sulfur-carrier protein]-C-terminal Gly-Gly + H(+) + L-cysteine;
CC         Xref=Rhea:RHEA:48732, Rhea:RHEA-COMP:12207, Rhea:RHEA-COMP:12212,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:35235,
CC         ChEBI:CHEBI:90778, ChEBI:CHEBI:90783; EC=3.13.1.6;
CC         Evidence={ECO:0000269|PubMed:16104727};
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000269|PubMed:16104727};
CC   -!- ACTIVITY REGULATION: Inhibited by EDTA in vitro.
CC       {ECO:0000269|PubMed:16104727}.
CC   -!- PATHWAY: Amino-acid biosynthesis; L-cysteine biosynthesis.
CC   -!- INDUCTION: Up-regulated under oxidative stress conditions.
CC       {ECO:0000269|PubMed:12123450}.
CC   -!- DISRUPTION PHENOTYPE: Strains lacking this gene are shown to be
CC       attenuated in macrophages. {ECO:0000269|PubMed:15928073}.
CC   -!- SIMILARITY: Belongs to the peptidase M67A family. {ECO:0000305}.
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DR   EMBL; AL123456; CCP44092.1; -; Genomic_DNA.
DR   PIR; B70771; B70771.
DR   RefSeq; NP_215850.1; NC_000962.3.
DR   RefSeq; WP_003898830.1; NZ_NVQJ01000031.1.
DR   AlphaFoldDB; P9WHS1; -.
DR   SMR; P9WHS1; -.
DR   STRING; 83332.Rv1334; -.
DR   MEROPS; M67.009; -.
DR   PaxDb; P9WHS1; -.
DR   DNASU; 886875; -.
DR   GeneID; 45425312; -.
DR   GeneID; 886875; -.
DR   KEGG; mtu:Rv1334; -.
DR   PATRIC; fig|83332.111.peg.1489; -.
DR   TubercuList; Rv1334; -.
DR   eggNOG; COG1310; Bacteria.
DR   OMA; GAHYVLV; -.
DR   PhylomeDB; P9WHS1; -.
DR   BioCyc; MetaCyc:G185E-5513-MON; -.
DR   BRENDA; 3.13.1.6; 3445.
DR   Reactome; R-MTU-936654; Cysteine synthesis from O-phosphoserine.
DR   UniPathway; UPA00136; -.
DR   Proteomes; UP000001584; Chromosome.
DR   GO; GO:0005829; C:cytosol; TAS:Reactome.
DR   GO; GO:0070122; F:isopeptidase activity; IEA:InterPro.
DR   GO; GO:0140492; F:metal-dependent deubiquitinase activity; IEA:InterPro.
DR   GO; GO:0008235; F:metalloexopeptidase activity; IDA:MTBBASE.
DR   GO; GO:0008270; F:zinc ion binding; IDA:MTBBASE.
DR   GO; GO:0019344; P:cysteine biosynthetic process; IDA:MTBBASE.
DR   GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR   InterPro; IPR028090; JAB_dom_prok.
DR   InterPro; IPR000555; JAMM/MPN+_dom.
DR   InterPro; IPR037518; MPN.
DR   Pfam; PF14464; Prok-JAB; 1.
DR   SMART; SM00232; JAB_MPN; 1.
DR   PROSITE; PS50249; MPN; 1.
PE   1: Evidence at protein level;
KW   Amino-acid biosynthesis; Cysteine biosynthesis; Hydrolase; Metal-binding;
KW   Metalloprotease; Protease; Reference proteome; Zinc.
FT   CHAIN           1..146
FT                   /note="CysO-cysteine peptidase"
FT                   /id="PRO_0000014095"
FT   DOMAIN          11..134
FT                   /note="MPN"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01182"
FT   MOTIF           88..101
FT                   /note="JAMM motif"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01182"
FT   BINDING         88
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01182"
FT   BINDING         90
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01182"
FT   BINDING         101
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01182"
SQ   SEQUENCE   146 AA;  16530 MW;  333945ED84CF2D5E CRC64;
     MLLRKGTVYV LVIRADLVNA MVAHARRDHP DEACGVLAGP EGSDRPERHI PMTNAERSPT
     FYRLDSGEQL KVWRAMEDAD EVPVVIYHSH TATEAYPSRT DVKLATEPDA HYVLVSTRDP
     HRHELRSYRI VDGAVTEEPV NVVEQY
 
 
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