MED14_ARATH
ID MED14_ARATH Reviewed; 1703 AA.
AC Q9SR02;
DT 11-JUL-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 14;
DE AltName: Full=Protein STRUWWELPETER;
DE Short=AtSWP;
GN Name=MED14; Synonyms=MED14_1, SWP; OrderedLocusNames=At3g04740;
GN ORFNames=F7O18.23;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, DISRUPTION PHENOTYPE, TISSUE
RP SPECIFICITY, AND DEVELOPMENTAL STAGE.
RC TISSUE=Flower;
RX PubMed=12426376; DOI=10.1093/emboj/cdf614;
RA Autran D., Jonak C., Belcram K., Beemster G.T., Kronenberger J.,
RA Grandjean O., Inze D., Traas J.;
RT "Cell numbers and leaf development in Arabidopsis: a functional analysis of
RT the STRUWWELPETER gene.";
RL EMBO J. 21:6036-6049(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP IDENTIFICATION BY MASS SPECTROMETRY, IDENTIFICATION IN THE MEDIATOR
RP COMPLEX, AND NOMENCLATURE.
RX PubMed=17560376; DOI=10.1016/j.molcel.2007.05.007;
RA Baeckstroem S., Elfving N., Nilsson R., Wingsle G., Bjoerklund S.;
RT "Purification of a plant mediator from Arabidopsis thaliana identifies PFT1
RT as the Med25 subunit.";
RL Mol. Cell 26:717-729(2007).
RN [5]
RP FUNCTION, AND INTERACTION WITH HDA19; LUG AND CDKE-1.
RX PubMed=17526732; DOI=10.1128/mcb.01912-06;
RA Gonzalez D., Bowen A.J., Carroll T.S., Conlan R.S.;
RT "The transcription corepressor LEUNIG interacts with the histone
RT deacetylase HDA19 and mediator components MED14 (SWP) and CDK8 (HEN3) to
RT repress transcription.";
RL Mol. Cell. Biol. 27:5306-5315(2007).
RN [6]
RP IDENTIFICATION, AND NOMENCLATURE.
RX PubMed=22021418; DOI=10.1104/pp.111.188300;
RA Mathur S., Vyas S., Kapoor S., Tyagi A.K.;
RT "The Mediator complex in plants: structure, phylogeny, and expression
RT profiling of representative genes in a dicot (Arabidopsis) and a monocot
RT (rice) during reproduction and abiotic stress.";
RL Plant Physiol. 157:1609-1627(2011).
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. The Mediator complex, having a compact
CC conformation in its free form, is recruited to promoters by direct
CC interactions with regulatory proteins and serves for the assembly of a
CC functional preinitiation complex with RNA polymerase II and the general
CC transcription factors. Involved in defining the duration of cell
CC proliferation. {ECO:0000269|PubMed:12426376,
CC ECO:0000269|PubMed:17526732}.
CC -!- SUBUNIT: Component of the Mediator complex. Interacts with CDKE-1,
CC HDA19 and LUG. {ECO:0000269|PubMed:17526732,
CC ECO:0000269|PubMed:17560376}.
CC -!- INTERACTION:
CC Q9SR02; F4IXJ7: MED6; NbExp=3; IntAct=EBI-1386248, EBI-1386187;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, stems, developing embryos,
CC young leaf primordia, shoot apical meristems, inflorescence meristems,
CC tapetum in anthers, ovules and floral organ primordia, but not in
CC mature organs. {ECO:0000269|PubMed:12426376}.
CC -!- DEVELOPMENTAL STAGE: During embryogenesis, detected in all cells from
CC the early octant to the torpedo stage. {ECO:0000269|PubMed:12426376}.
CC -!- DISRUPTION PHENOTYPE: Dwarf plants with disorganized shoot apical
CC meristem, stem fasciation, abnormal floral structure, delayed flowering
CC and sterile flowers. Reduced cell numbers in aerial organs.
CC {ECO:0000269|PubMed:12426376}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 14 family.
CC {ECO:0000305}.
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DR EMBL; AJ511271; CAD53582.1; -; mRNA.
DR EMBL; AC011437; AAF04900.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE74130.1; -; Genomic_DNA.
DR EMBL; AF466359; AAM09647.1; -; mRNA.
DR RefSeq; NP_187125.1; NM_111346.4.
DR AlphaFoldDB; Q9SR02; -.
DR BioGRID; 4969; 12.
DR IntAct; Q9SR02; 3.
DR STRING; 3702.AT3G04740.1; -.
DR iPTMnet; Q9SR02; -.
DR PaxDb; Q9SR02; -.
DR PRIDE; Q9SR02; -.
DR ProteomicsDB; 238251; -.
DR EnsemblPlants; AT3G04740.1; AT3G04740.1; AT3G04740.
DR GeneID; 819634; -.
DR Gramene; AT3G04740.1; AT3G04740.1; AT3G04740.
DR KEGG; ath:AT3G04740; -.
DR Araport; AT3G04740; -.
DR TAIR; locus:2084948; AT3G04740.
DR eggNOG; KOG1875; Eukaryota.
DR HOGENOM; CLU_002817_0_0_1; -.
DR InParanoid; Q9SR02; -.
DR OMA; GSCPFIK; -.
DR OrthoDB; 30000at2759; -.
DR PhylomeDB; Q9SR02; -.
DR PRO; PR:Q9SR02; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SR02; baseline and differential.
DR Genevisible; Q9SR02; AT.
DR GO; GO:0070847; C:core mediator complex; IBA:GO_Central.
DR GO; GO:0016592; C:mediator complex; IDA:UniProtKB.
DR GO; GO:0009506; C:plasmodesma; HDA:TAIR.
DR GO; GO:0003712; F:transcription coregulator activity; IDA:TAIR.
DR GO; GO:0009738; P:abscisic acid-activated signaling pathway; IDA:TAIR.
DR GO; GO:0009631; P:cold acclimation; IMP:TAIR.
DR GO; GO:0008284; P:positive regulation of cell population proliferation; IMP:TAIR.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IDA:TAIR.
DR GO; GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR GO; GO:0009627; P:systemic acquired resistance; IEP:TAIR.
DR InterPro; IPR013947; Mediator_Med14.
DR PANTHER; PTHR12809; PTHR12809; 1.
DR Pfam; PF08638; Med14; 1.
PE 1: Evidence at protein level;
KW Activator; Developmental protein; Growth regulation; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..1703
FT /note="Mediator of RNA polymerase II transcription subunit
FT 14"
FT /id="PRO_0000418118"
FT REGION 755..781
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1703 AA; 185509 MW; 5C68D7E02FB66A39 CRC64;
MAELGQQTVD FSALVGRAAE ESFLSFKELV DKSKSTELSD TEKKVSLLKY VAKTQQRMLR
LNALAKWCKQ VPLINYFQDL GSTLSAHDIC FTQAADSLFF MHEGLQQARA PVYDVPSAVE
ILLTGSYQRL PKCLDDVGMQ SSLDEHQQKP ALRKLEVLVR SKLLEITLPK EITEVKISKG
TVTLSVDGEF KVLVTLGYRG HLSMWRILHL DLLVGERSGP IKLEVTRRHI LGDDLERRMS
VAENPFTILY AVLHELCVAI VMDTVIRQVR ALLQGRWKDA IRFDLISDTG TTPANQEGEA
DSVSLRTPGM KLFYWSDSDK NSGPFIKIEP GSDLQIKCSH STFVIDPLTG KEAEFSLDQS
CIDVEKLLLK AICCNRYTRL LEIQKELLRN TRICRTPSDV ILQALLDEPG IEGDNMVDSK
ERVEPEVLRV RAYGSSFFTL GINIRTGRFL LQSSKSILTS SILEEFEDAL NQGSISAVDA
FINLRSKSIL HFFAAIGKFL GLEVYEHGFG INKVPKSLLD GSSILTLGFP DCESSHLLLM
ELEKDFTPLF KLLETQMDGS GKPQSFNDPS NILRAKKIDI GQIRILEDDL NLITSDVVKF
VSSFSDAEGI NQASGHRQPG LVDEALTEMS GSQLSFSSVV DGVFGLQKVT SALMSIDGHG
LVPKNLSAVT GHGKAPMLTS YHSDSLYNRQ GPLQSSSYNM LSSPPGKGSA MKKIAISNSD
QELSLILSPS LSTGNGVSES GSRLVTESSL SPLPLSQTAD LATSSAGPLL RKDQKPRKRS
ASDLLRLIPS LQVVEGVASP NKRRKTSELV QSELVKSWSP ASQTLSTAVS TSTKTIGCSY
GNLIAEANKG NAPSSVFVYA LLHVVRHSSL SIKHAKLTSQ MEALDIQYVE EMGLRDAFSD
IWFRLPFAQN DSWQHICLQL GRPGSMCWDV KINDQHFRDL WELQKGSKTT PWGSGVHIAN
SSDVDSHIRY DPEGVVLSYQ SVEADSIKKL VADIQRLSNA RMFSLGMRKL LGIKPDEKTE
ECSANSTMKG STGGKGSGEP VDRWRAFKIE AVGLTSLWFS FGSGVLARFV VEWESGKDGC
TMHVSPDQLW PHTKFLEDFI NGAEVESLLD CIRLTAGPLH ALAAATRPAR ASTATGMPVV
PATASSRQSN QIQQTQGIIA PSTLAAPNAT GQSASATSGN TVASSAPSPL GGGFHGVAML
AAAGRSGPGI VPSSLLPIDV SVVLRGPYWI RIIYRKRFAV DMRCFAGDQV WLQPATPPKG
GASIGGSLPC PQFRPFIMEH VAQELNGLEP NLTGSQGATN PNSGNPTVNG VNRVNFSPSS
ARAAMNRVAS VASGSLVVSS GLPVRRTPGT AVPAHVRGEL NTAIIGLGDD GGYGGGWVPL
VALKKVLRGI LKYLGVLWLF AQLPDLLREI LGSILKDNEG ALLNLDQEQP ALRFFVGGYV
FAVSVHRVQL LLQVLSVRRF HHQAQQNGSS AAAQEELTQS EIGEICDYFS RRVASEPYDA
SRVASFITLL TLPISVLREF LKLIAWKKGL SQSQQAGEIA PAQRPRIELC LENHSGTDLD
NNCAAKSNIH YDRPHNTVDF ALTVVLDPVH IPHINAAGGA AWLPYCVSVR LRYTFGENPS
VTFLGMEGSH GGRACWQRVD DWEKCKQRVS RTVEVNGSAA GDLTQGKLKL VADSVQRTLH
LCLQGLREGG NNNNNTHQKE FTI