MED16_NEOFI
ID MED16_NEOFI Reviewed; 955 AA.
AC A1D327;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 1.
DT 25-MAY-2022, entry version 67.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 16;
DE AltName: Full=Mediator complex subunit 16;
GN Name=sin4; Synonyms=med16; ORFNames=NFIA_015120;
OS Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164
OS / JCM 1740 / NRRL 181 / WB 181) (Aspergillus fischerianus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Fumigati.
OX NCBI_TaxID=331117;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181
RC / WB 181;
RX PubMed=18404212; DOI=10.1371/journal.pgen.1000046;
RA Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., Anderson M.J.,
RA Crabtree J., Silva J.C., Badger J.H., Albarraq A., Angiuoli S., Bussey H.,
RA Bowyer P., Cotty P.J., Dyer P.S., Egan A., Galens K., Fraser-Liggett C.M.,
RA Haas B.J., Inman J.M., Kent R., Lemieux S., Malavazi I., Orvis J.,
RA Roemer T., Ronning C.M., Sundaram J.P., Sutton G., Turner G., Venter J.C.,
RA White O.R., Whitty B.R., Youngman P., Wolfe K.H., Goldman G.H.,
RA Wortman J.R., Jiang B., Denning D.W., Nierman W.C.;
RT "Genomic islands in the pathogenic filamentous fungus Aspergillus
RT fumigatus.";
RL PLoS Genet. 4:E1000046-E1000046(2008).
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the Mediator complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 16 family.
CC {ECO:0000305}.
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DR EMBL; DS027688; EAW22820.1; -; Genomic_DNA.
DR RefSeq; XP_001264717.1; XM_001264716.1.
DR AlphaFoldDB; A1D327; -.
DR STRING; 331117.A1D327; -.
DR EnsemblFungi; EAW22820; EAW22820; NFIA_015120.
DR GeneID; 4590885; -.
DR KEGG; nfi:NFIA_015120; -.
DR VEuPathDB; FungiDB:NFIA_015120; -.
DR eggNOG; ENOG502QQU3; Eukaryota.
DR HOGENOM; CLU_007624_0_0_1; -.
DR OMA; FFDTTWL; -.
DR OrthoDB; 209987at2759; -.
DR Proteomes; UP000006702; Unassembled WGS sequence.
DR GO; GO:0016592; C:mediator complex; IEA:InterPro.
DR InterPro; IPR021665; Mediator_Med16.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR13224; PTHR13224; 1.
DR Pfam; PF11635; Med16; 1.
DR SUPFAM; SSF50978; SSF50978; 1.
PE 3: Inferred from homology;
KW Activator; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..955
FT /note="Mediator of RNA polymerase II transcription subunit
FT 16"
FT /id="PRO_0000307630"
SQ SEQUENCE 955 AA; 104664 MW; E204DA676B5C94BC CRC64;
MPLIMEDGIN VDDLFGEPGS LELGLSPSTP SPRGLAQRLD EMRLIGCCQK IAWSKLGCIA
YISQDGLRVN VRHLQCRPSD GKWVLSEETP LLPVTDAHGG HTLVHLCWNE PGAELAVADS
SGRVSIYSIS IALNSIAGHR QAAFDPDDDG AQIVGMMWLN TQRTVHSFYQ AAKVQGRWAY
SPFRRRPIGP FHPVNKAGLV CVTRSGIIRL LYQNPDSRWA EISAELKNTG YSDRLLTHAA
LVSTQGGILV ATHSACQKIC LYRVHIAWTP TQYDPGQQKP PAPWPVPSFR FLHCKVESQC
DVPGTNRNAG DNAQGLPSFT NSFYCLTGLD IVLPALDNPA GSTANPWVVA IYSAPLHVTQ
DHPQQQGPAS VIVRWQLDTG PLTLHPKFDD VPSKKNNAQV KPKLELRRLD DVYSDKYAIS
IDQIEYGNVL AITYDDGSVV FYDPKTMAVF NGVDDANTVT SLAQAGFHHP PEPSGLHISF
SPNACAAVML DGEGQTHLRL TEHSYGAEGG LHDENKYSAA IAALTLAFCR GCGSDVNTDD
ILLILVRQLT PEAQATFINE AYRALPINCN FTVEQDKLMN HPYIPRCLSI QAALGFKNKY
TPRSFASSIP WAVLQLRHAS VLYAFFFQYN KGGATEPHDP DVLRMVLGNT KWALDFSFYV
LNELFDLADD FESLSGDQEA FTQKLKSTSS LPLIILLSSM SRAFLRFICR GLRGIYAGYA
TAAPLSGDAR VYYAEIYQTL ESAPIRIDAY EKFLAGVDSA VRHAYHGAGF GDAERPGPEK
ELLVNARVPP VLVPAVSTIL RQTVPALKTE IDRITIYMGD YSWLGLSNDR RTEMYRRNRD
VDIIKKIPCR PAASALPETN ANANANQNGK SSTQVQQRRR RCVRCCEVSS DTHPPRSLLS
FRMIAKLGLL RACVCGGMWT LEPSVYSSAQ SSGAPVGQAT GRTPALMAAG LAGSS