MED17_COCIM
ID MED17_COCIM Reviewed; 691 AA.
AC Q1DLD2; J3K1S5;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2006, sequence version 1.
DT 25-MAY-2022, entry version 74.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 17;
DE AltName: Full=Mediator complex subunit 17;
GN Name=SRB4; Synonyms=MED17; ORFNames=CIMG_08881;
OS Coccidioides immitis (strain RS) (Valley fever fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides.
OX NCBI_TaxID=246410;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RS;
RX PubMed=19717792; DOI=10.1101/gr.087551.108;
RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA Henn M.R., Birren B.W., Taylor J.W.;
RT "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT and their relatives.";
RL Genome Res. 19:1722-1731(2009).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=RS;
RX PubMed=20516208; DOI=10.1101/gr.103911.109;
RA Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J.,
RA Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D.,
RA Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A.,
RA FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J.,
RA Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R.,
RA Taylor J.W., Rounsley S.D.;
RT "Population genomic sequencing of Coccidioides fungi reveals recent
RT hybridization and transposon control.";
RL Genome Res. 20:938-946(2010).
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the Mediator complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 17 family.
CC {ECO:0000305}.
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DR EMBL; GG704913; EAS30135.3; -; Genomic_DNA.
DR RefSeq; XP_001241718.1; XM_001241717.2.
DR AlphaFoldDB; Q1DLD2; -.
DR STRING; 246410.Q1DLD2; -.
DR EnsemblFungi; EAS30135; EAS30135; CIMG_08881.
DR GeneID; 4560685; -.
DR KEGG; cim:CIMG_08881; -.
DR VEuPathDB; FungiDB:CIMG_08881; -.
DR InParanoid; Q1DLD2; -.
DR OMA; GVTTRQN; -.
DR OrthoDB; 900096at2759; -.
DR Proteomes; UP000001261; Unassembled WGS sequence.
DR GO; GO:0016592; C:mediator complex; IEA:InterPro.
DR GO; GO:0003712; F:transcription coregulator activity; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR InterPro; IPR019313; Mediator_Med17.
DR PANTHER; PTHR13114; PTHR13114; 1.
DR Pfam; PF10156; Med17; 1.
PE 3: Inferred from homology;
KW Activator; Coiled coil; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..691
FT /note="Mediator of RNA polymerase II transcription subunit
FT 17"
FT /id="PRO_0000304715"
FT COILED 158..185
FT /evidence="ECO:0000255"
SQ SEQUENCE 691 AA; 78120 MW; 144647B31F7EC588 CRC64;
MSNSFTLPLR PARQKANRED DLAVKIAQIN AQKGSFRDVT EASLLAEIEA ARAVGDGEAE
AVDVKTGEDE EENREEKLFK SRLEISQFAM NAHMEATYAL EFVSLLLSKH APRQAETSMS
PLLKQKVPLG SLGADHIKPP EQSETQKRDV DAVSRGWKLE SFDAAANKLL QSAQRLEEDI
AAETKYWSEV LKIKEKGWKV CRLPQERQTL GVHFGFLEST QNFRDRGLAA LRKGEAGRLI
LDRGIQLKPP RFVRVRVQRG DQTLGLTIPA ISKQLDDQCL DGRIREARDS LYEEELFYEL
NREARVLLQY GVEIRRDLLK FPADDNKHIF VDLVGLDEAL PDIGGLDPLD NLLAEGVAKS
FRILLSYAHR KNHHRRTRVP PPVTPNKRPA PEYNIIRPLL CYFQHRSHYQ WFTSFFGTLS
KTLRSAGLKC SYTLYPLMKR PQSRAGSSQQ TLTVSSVERL IDTLINPSES IISCNLISQG
SVFRVRITTN VNPNGLGSEF ELVTNLAHFP AQQSPFRFGL REDVRDLIIH LFTLDLVYLV
PSLVKGSASA GASQYLISRY TGSQAFVEEE STDENEFAPS PAAKQDDVYL LPWQPTFPQQ
GELTAYSPAR CRTKKLQIQL QSDQLQLRCF WVRHRGPSTK ADEQPGERLF TWRAVDMLGG
AEESSRPTLQ RVMELLGEKY DDQTVQNIGS K