MED18_CANAL
ID MED18_CANAL Reviewed; 351 AA.
AC Q59X40; A0A1D8PIB3;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 26-APR-2005, sequence version 1.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 18;
DE AltName: Full=Mediator complex subunit 18;
GN Name=SRB5; Synonyms=MED18; OrderedLocusNames=CAALFM_C209300WA;
GN ORFNames=CaO19.11572, CaO19.4091;
OS Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX NCBI_TaxID=237561;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=15123810; DOI=10.1073/pnas.0401648101;
RA Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B.,
RA Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W.,
RA Scherer S.;
RT "The diploid genome sequence of Candida albicans.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
RA van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
RA Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
RA Chibana H., Nantel A., Magee P.T.;
RT "Assembly of the Candida albicans genome into sixteen supercontigs aligned
RT on the eight chromosomes.";
RL Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
RA Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
RT "Assembly of a phased diploid Candida albicans genome facilitates allele-
RT specific measurements and provides a simple model for repeat and indel
RT structure.";
RL Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the Mediator complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 18 family.
CC {ECO:0000305}.
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DR EMBL; CP017624; AOW27913.1; -; Genomic_DNA.
DR RefSeq; XP_714262.1; XM_709169.1.
DR AlphaFoldDB; Q59X40; -.
DR BioGRID; 1227197; 3.
DR STRING; 237561.Q59X40; -.
DR PRIDE; Q59X40; -.
DR GeneID; 3644103; -.
DR KEGG; cal:CAALFM_C209300WA; -.
DR CGD; CAL0000197175; MED18.
DR VEuPathDB; FungiDB:C2_09300W_A; -.
DR eggNOG; ENOG502S41C; Eukaryota.
DR HOGENOM; CLU_058255_0_0_1; -.
DR InParanoid; Q59X40; -.
DR OMA; PGKVNQI; -.
DR OrthoDB; 1167687at2759; -.
DR PRO; PR:Q59X40; -.
DR Proteomes; UP000000559; Chromosome 2.
DR GO; GO:0070847; C:core mediator complex; IBA:GO_Central.
DR GO; GO:0016592; C:mediator complex; IBA:GO_Central.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR GO; GO:0006369; P:termination of RNA polymerase II transcription; IBA:GO_Central.
DR InterPro; IPR019095; Mediator_Med18.
DR PANTHER; PTHR13321; PTHR13321; 1.
DR Pfam; PF09637; Med18; 1.
PE 3: Inferred from homology;
KW Activator; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..351
FT /note="Mediator of RNA polymerase II transcription subunit
FT 18"
FT /id="PRO_0000304757"
FT REGION 153..231
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 162..206
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 217..231
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 351 AA; 40184 MW; B41F1E5763C67E37 CRC64;
MVHQLSLVSS IPHNKYLQTI STLQALTGLI QPESISTYTL LAKPSYAFKP KFEPGKVNQI
EQYYMRCITT WNSDKQGDDE KVEKGFDISE PFINKESNIV VRKLFTEEDS VERVWTLQVS
DIPVAGKNQG CCQQQIYEST LVHTHTAIEI KVGNGDPIDI DTNNDKQGDN NTDKPKQEHD
GKLPEAIDED IIKNGDEKKT THDDNDSDIM EIDEPNPETQ TLPQSLSNGV SQRTTRKDSF
LIFLSDLGYE VINQYWQKGV RFFYGDIIIE IYKIFIRDES SQADSNEGIK LKLLDDSNQF
QIKAYININK STEIDSINSG VKELIKLQEF LKNLFVLEIP DRMFMDSRIK Q