MED18_DICDI
ID MED18_DICDI Reviewed; 251 AA.
AC Q54MR3;
DT 03-NOV-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 25-MAY-2022, entry version 79.
DE RecName: Full=Putative mediator of RNA polymerase II transcription subunit 18;
DE AltName: Full=Putative mediator complex subunit 18;
GN Name=med18; ORFNames=DDB_G0285713;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [2]
RP NOMENCLATURE.
RX PubMed=18515835; DOI=10.1093/nar/gkn349;
RA Bourbon H.-M.;
RT "Comparative genomics supports a deep evolutionary origin for the large,
RT four-module transcriptional mediator complex.";
RL Nucleic Acids Res. 36:3993-4008(2008).
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the Mediator complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 18 family.
CC {ECO:0000305}.
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DR EMBL; AAFI02000079; EAL64694.1; -; Genomic_DNA.
DR RefSeq; XP_638230.1; XM_633138.1.
DR AlphaFoldDB; Q54MR3; -.
DR SMR; Q54MR3; -.
DR STRING; 44689.DDB0266918; -.
DR PaxDb; Q54MR3; -.
DR EnsemblProtists; EAL64694; EAL64694; DDB_G0285713.
DR GeneID; 8625278; -.
DR KEGG; ddi:DDB_G0285713; -.
DR dictyBase; DDB_G0285713; med18.
DR eggNOG; KOG3264; Eukaryota.
DR HOGENOM; CLU_1108740_0_0_1; -.
DR InParanoid; Q54MR3; -.
DR OMA; YAEYLYP; -.
DR PhylomeDB; Q54MR3; -.
DR PRO; PR:Q54MR3; -.
DR Proteomes; UP000002195; Chromosome 4.
DR GO; GO:0070847; C:core mediator complex; IBA:GO_Central.
DR GO; GO:0016592; C:mediator complex; IBA:GO_Central.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR GO; GO:0006369; P:termination of RNA polymerase II transcription; IBA:GO_Central.
DR GO; GO:0006366; P:transcription by RNA polymerase II; ISS:dictyBase.
DR InterPro; IPR019095; Mediator_Med18.
DR PANTHER; PTHR13321; PTHR13321; 1.
DR Pfam; PF09637; Med18; 1.
PE 3: Inferred from homology;
KW Activator; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..251
FT /note="Putative mediator of RNA polymerase II transcription
FT subunit 18"
FT /id="PRO_0000388656"
SQ SEQUENCE 251 AA; 28507 MW; FD4DF98F5F710BC0 CRC64;
MFQQNKHHQQ QQQQQQQQGV VQSGVASATV NNPSESIVAG NIYECSLHGI LSTPSSTFIQ
RAKGMMRCEH PVSYKEMVFK STVQSAGPSW AEGSILPSEI HVRYEKNTVY VRYVGVPQIK
DNINAMIRNV VDIKSSETFF IYLENLGYVK DYEYFVDGYQ YSTYNLSLFL VNHRRVLNDG
TKGELLNKHS MVELQCLSGE EGFVAAAEYL NTYAEYLYPF VELIKFDHRL LTAENSNTPT
TNVNVVGGYN R