MED1_DICDI
ID MED1_DICDI Reviewed; 724 AA.
AC Q54SI1;
DT 07-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Putative mediator of RNA polymerase II transcription subunit 1;
DE AltName: Full=Putative mediator complex subunit 1;
GN Name=med1; ORFNames=DDB_G0282453;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [2]
RP NOMENCLATURE.
RX PubMed=18515835; DOI=10.1093/nar/gkn349;
RA Bourbon H.-M.;
RT "Comparative genomics supports a deep evolutionary origin for the large,
RT four-module transcriptional mediator complex.";
RL Nucleic Acids Res. 36:3993-4008(2008).
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the Mediator complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 1 family.
CC {ECO:0000305}.
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DR EMBL; AAFI02000047; EAL66086.1; -; Genomic_DNA.
DR RefSeq; XP_640058.1; XM_634966.1.
DR AlphaFoldDB; Q54SI1; -.
DR STRING; 44689.DDB0266834; -.
DR PaxDb; Q54SI1; -.
DR EnsemblProtists; EAL66086; EAL66086; DDB_G0282453.
DR GeneID; 8623585; -.
DR KEGG; ddi:DDB_G0282453; -.
DR dictyBase; DDB_G0282453; med1.
DR eggNOG; ENOG502SF7Q; Eukaryota.
DR HOGENOM; CLU_382400_0_0_1; -.
DR InParanoid; Q54SI1; -.
DR OMA; QTIKFTC; -.
DR PRO; PR:Q54SI1; -.
DR Proteomes; UP000002195; Chromosome 3.
DR GO; GO:0016592; C:mediator complex; ISS:dictyBase.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:UniProt.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR019680; Mediator_Med1.
DR Pfam; PF10744; Med1; 1.
PE 3: Inferred from homology;
KW Activator; Coiled coil; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..724
FT /note="Putative mediator of RNA polymerase II transcription
FT subunit 1"
FT /id="PRO_0000379419"
FT REGION 33..52
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 147..167
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 486..524
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 140..200
FT /evidence="ECO:0000255"
SQ SEQUENCE 724 AA; 83687 MW; 60DA7BA74CA92273 CRC64;
MDHHKQLTLQ TTLESCNNLY NLLFNSIGSI KPSQQQQQQQ QNQKNTNSVT SNTNIINDQE
IFKLNKFHLY GENNIDELYN SIELQLQTIK FTCQQYRQWD STERDSIKFF NTQKLYNQSQ
QRGNLVSKTL FDCSLLGKIY LNQQKEQQQQ QKQKNKQQQQ QPQPLVEDLS KNISKTVEVK
RKLGLLAGKL QEMTNELNNK YSTFSVLDDL LGLLKSNTEI DYNSDSYVSC NISSSTFLLD
IDIYHNGEIK EVKLVHILTT TGEVEPAEQQ FNDELTNSLK TDMKEFIKKV QRICDLDLLF
RKYKHFDLQK AFSILQSDFL NISINSNIKY IDNKEIEMNK GFGEIKLDCC GVLIKYFQSY
IEKISKMNEP YSIMIEMESS AVTNNGSLID QSEYSRLSLK TLLQKQQHTQ PSAQTDYSEQ
QQQQSISTQL TSIEFNEKDC LDCEPLSSML ESDSIFSPVR LVCKLNKPIL ITNQQLSKIL
NLSKIHRSSQ QPSQQQPSQQ QQQQQQQQQQ KKLNSVDESM NENGDSNIIE NINELIKKYS
IQNLLISSSS SSSSSNDSNI SVNVDNSFDC EVYGMKQRYY YTGEFELGIE ISRIPIYHPS
QVYPTIQLLR QQIVFNILFK SCFQNLNISK SDDHHNIIDN NNDVKIFEIT SNPPNSINII
FLHPIDNSFN SIDIFIKNNG DLEAFYYDNT TNIQPNIQKS TLFTKMLIKS LSISVSLACF
FKNK