MED20_CHICK
ID MED20_CHICK Reviewed; 211 AA.
AC Q5ZKY9;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 20;
DE AltName: Full=Mediator complex subunit 20;
DE AltName: Full=TRF-proximal protein homolog;
GN Name=MED20; Synonyms=TRFP; ORFNames=RCJMB04_8k10;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the Mediator complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 20 family.
CC {ECO:0000305}.
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DR EMBL; AJ719945; CAG31604.1; -; mRNA.
DR RefSeq; NP_001006327.1; NM_001006327.2.
DR AlphaFoldDB; Q5ZKY9; -.
DR SMR; Q5ZKY9; -.
DR STRING; 9031.ENSGALP00000005490; -.
DR PaxDb; Q5ZKY9; -.
DR Ensembl; ENSGALT00000005500; ENSGALP00000005490; ENSGALG00000003474.
DR GeneID; 419926; -.
DR KEGG; gga:419926; -.
DR CTD; 9477; -.
DR VEuPathDB; HostDB:geneid_419926; -.
DR eggNOG; KOG4309; Eukaryota.
DR GeneTree; ENSGT00390000002060; -.
DR HOGENOM; CLU_080044_1_0_1; -.
DR InParanoid; Q5ZKY9; -.
DR OMA; QSTFSIC; -.
DR OrthoDB; 1112080at2759; -.
DR PhylomeDB; Q5ZKY9; -.
DR TreeFam; TF315156; -.
DR Reactome; R-GGA-212436; Generic Transcription Pathway.
DR PRO; PR:Q5ZKY9; -.
DR Proteomes; UP000000539; Chromosome 26.
DR Bgee; ENSGALG00000003474; Expressed in heart and 12 other tissues.
DR GO; GO:0016592; C:mediator complex; IBA:GO_Central.
DR GO; GO:0003713; F:transcription coactivator activity; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR013921; Mediator_Med20.
DR PANTHER; PTHR12465; PTHR12465; 1.
DR Pfam; PF08612; Med20; 1.
PE 2: Evidence at transcript level;
KW Activator; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..211
FT /note="Mediator of RNA polymerase II transcription subunit
FT 20"
FT /id="PRO_0000308556"
SQ SEQUENCE 211 AA; 23289 MW; 34FC6DE6EFF16756 CRC64;
MGVTCVTQVP VLEGKSVQQT VELLSKKLEL LGAEKHGAFG VDCETYHTAA AISSQGQTGK
LMYVMHNSEY PLSCFALFEN GPCLIADANF DTLMVKLKGF FQNAKANKIE SRGTRYQYCD
FLVKVGTVTM GPSARGISVE VEYCPCVIAN DCWNLLMEFM QSFMGSHTPG IPSVFGTKHD
SIYSPADTMV QYMELFNKIR KQQQVPVAGI R