MED25_XENLA
ID MED25_XENLA Reviewed; 801 AA.
AC Q6GP15;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 62.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 25;
DE AltName: Full=Mediator complex subunit 25;
GN Name=med25;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Spleen;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the Mediator complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 25 family.
CC {ECO:0000305}.
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DR EMBL; BC073333; AAH73333.1; -; mRNA.
DR RefSeq; NP_001085778.1; NM_001092309.1.
DR RefSeq; XP_018082410.1; XM_018226921.1.
DR AlphaFoldDB; Q6GP15; -.
DR SMR; Q6GP15; -.
DR DNASU; 444205; -.
DR GeneID; 444205; -.
DR KEGG; xla:444205; -.
DR CTD; 444205; -.
DR Xenbase; XB-GENE-5831033; med25.S.
DR OMA; FRNQAPQ; -.
DR OrthoDB; 340324at2759; -.
DR Proteomes; UP000186698; Chromosome 7S.
DR Bgee; 444205; Expressed in ovary and 19 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR Gene3D; 2.40.290.30; -; 1.
DR InterPro; IPR045105; Med25/PTOV1.
DR InterPro; IPR021394; Med25_PTOV.
DR InterPro; IPR038196; Med25_PTOV_sf.
DR InterPro; IPR021406; Mediator_Med25_NR-box.
DR InterPro; IPR021397; Mediator_Med25_SD1.
DR InterPro; IPR021419; Mediator_Med25_VWA.
DR InterPro; IPR002035; VWF_A.
DR InterPro; IPR036465; vWFA_dom_sf.
DR PANTHER; PTHR12433; PTHR12433; 1.
DR Pfam; PF11232; Med25; 1.
DR Pfam; PF11244; Med25_NR-box; 1.
DR Pfam; PF11235; Med25_SD1; 1.
DR Pfam; PF11265; Med25_VWA; 1.
DR SUPFAM; SSF53300; SSF53300; 1.
DR PROSITE; PS50234; VWFA; 1.
PE 2: Evidence at transcript level;
KW Activator; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..801
FT /note="Mediator of RNA polymerase II transcription subunit
FT 25"
FT /id="PRO_0000304955"
FT REGION 647..735
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 689..693
FT /note="LXXLL motif"
FT COMPBIAS 647..677
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 684..735
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 801 AA; 86512 MW; 255518A1935C4E9F CRC64;
MDAATPGNGI ISDVVFVIEG TANLGPYFES LRKHYLLPAI EYFNGGPPAE TDFGGDYGGT
QYSLVVFNTV DCAPESYVQC HAPTSSAYEF VQWLDSIKFM GGGGESCSLI AEGLSTALQL
FDDFKKMREQ IGQTHKVCIL ICNSPPYLLP AVESTTYSGY TTENLVQKIG ERGIHFSIIS
PRKLPALRTL FEKAMPVGLI EPQPKDYSQD PRHMILVRGM VLPVGGATSV PGVMPPKQHI
SQPPLPVVPP QIASAPSHQL PPVQPPYMQV PQQSTLTPAH AAAHSAVEAA KNQKNSPSNR
FLLPNLNPMP NAPAVGTPFN QPPAPTLPPN ASVPKMVPSP SSLMTPASQS SLITTVTTGP
GPAPVQLQQQ GAPQQPVPPS MPITGAVGGV QAPQPSQPQI GTVQLPCTQT PVNGNKLLAW
SGVLEWQEKP RSVSVDNNAK LTRSLPCQVY INPGENLKTD QWPQKLIMQL IPQQLLTTLG
PLFRNSRMVQ FHFTNKDLES LKGLYRIMGS GFAGCVHFPH TTPCEVRVLM LLYSSKKKIF
MGLIPNDQSG FVNGIRQVIT NHKQVQMQKI DQQRNMGAVQ GVGAGSVPAN SQGFLQKQPG
TLPVGQAVSQ QMQGQQVAPG MPSISQVAMM DEQQRSQNLL HIRVQQPQQL ASQAPPQATQ
SSVQAPGQPQ NPQPGAMLRP QNPGANPQLR NLLLSQQPPQ SSVPQTQQPL HHMQQAAQSM
LPHQAMGQQM QHQAPGQLQL PGQSLMHQTP AQQWGNQMQQ RAPIPGTLMM SAGPRGPVPQ
SGLQQVQAQS VMEDDILMDL I