MED4_CAEBR
ID MED4_CAEBR Reviewed; 334 AA.
AC Q621Z7; A8WUP6;
DT 10-JAN-2006, integrated into UniProtKB/Swiss-Prot.
DT 19-JAN-2010, sequence version 3.
DT 25-MAY-2022, entry version 64.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 4;
DE AltName: Full=Mediator complex subunit 4;
GN Name=mdt-4; ORFNames=CBG02282;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the Mediator complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 4 family.
CC {ECO:0000305}.
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DR EMBL; HE601438; CAP24208.2; -; Genomic_DNA.
DR AlphaFoldDB; Q621Z7; -.
DR SMR; Q621Z7; -.
DR STRING; 6238.CBG02282; -.
DR EnsemblMetazoa; CBG02282.1; CBG02282.1; WBGene00025360.
DR WormBase; CBG02282; CBP37598; WBGene00025360; Cbr-mdt-4.
DR eggNOG; KOG4552; Eukaryota.
DR HOGENOM; CLU_832182_0_0_1; -.
DR InParanoid; Q621Z7; -.
DR OMA; TPNEKQW; -.
DR OrthoDB; 1333917at2759; -.
DR Proteomes; UP000008549; Chromosome II.
DR GO; GO:0070847; C:core mediator complex; IBA:GO_Central.
DR GO; GO:0016592; C:mediator complex; IEA:InterPro.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR019258; Mediator_Med4.
DR PANTHER; PTHR13208; PTHR13208; 1.
DR Pfam; PF10018; Med4; 1.
PE 3: Inferred from homology;
KW Activator; Coiled coil; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..334
FT /note="Mediator of RNA polymerase II transcription subunit
FT 4"
FT /id="PRO_0000390785"
FT REGION 188..234
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 252..334
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 76..100
FT /evidence="ECO:0000255"
FT COMPBIAS 188..227
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 252..286
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 306..320
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 334 AA; 36470 MW; 218597ECDF4B13D3 CRC64;
MTESDERSLR DLLLESADDL ENVLKMIIDT LINREKSVML KSGESVTNIV RLFDAKQESV
RKLLQKVPEF QERESLIRTL KAHVEKRDEV IQQVENNLKA CEVALTRSCF HANQKVKKMN
EAALRPVNSE TLIKLSHQIS KHNSVSAPLT WQIGDPSRPF PQEHEFRTGQ LLNPKIQSSG
PQILLGKSSA QKPIIASPSA SSSNGGTAPT RTVGTPLVNS ATNGDYSPRT GYGAEETSPI
QEQVLLGVTP NEKQWQNPPM PGAATSSQSP LSGAPQSPSS PSVKLKISGI PNRPGDIDQV
QEVRDVEQMS SDSSNSSDSS DDEGSSKKTR GRNK