MED4_CANAL
ID MED4_CANAL Reviewed; 323 AA.
AC Q59U73; A0A1D8PHX4;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 15-MAR-2017, sequence version 2.
DT 25-MAY-2022, entry version 85.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 4;
DE AltName: Full=Mediator complex subunit 4;
GN Name=MED4; OrderedLocusNames=CAALFM_C207500CA;
GN ORFNames=CaO19.1878, CaO19.9434;
OS Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX NCBI_TaxID=237561;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=15123810; DOI=10.1073/pnas.0401648101;
RA Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B.,
RA Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W.,
RA Scherer S.;
RT "The diploid genome sequence of Candida albicans.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
RA van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
RA Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
RA Chibana H., Nantel A., Magee P.T.;
RT "Assembly of the Candida albicans genome into sixteen supercontigs aligned
RT on the eight chromosomes.";
RL Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
RA Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
RT "Assembly of a phased diploid Candida albicans genome facilitates allele-
RT specific measurements and provides a simple model for repeat and indel
RT structure.";
RL Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the Mediator complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 4 family.
CC {ECO:0000305}.
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DR EMBL; CP017624; AOW27748.1; -; Genomic_DNA.
DR RefSeq; XP_713135.2; XM_708042.2.
DR AlphaFoldDB; Q59U73; -.
DR SMR; Q59U73; -.
DR BioGRID; 1228243; 2.
DR STRING; 237561.Q59U73; -.
DR PRIDE; Q59U73; -.
DR GeneID; 3645209; -.
DR KEGG; cal:CAALFM_C207500CA; -.
DR CGD; CAL0000181311; MED4.
DR VEuPathDB; FungiDB:C2_07500C_A; -.
DR eggNOG; ENOG502RXM0; Eukaryota.
DR HOGENOM; CLU_071875_0_0_1; -.
DR InParanoid; Q59U73; -.
DR OrthoDB; 1527310at2759; -.
DR PRO; PR:Q59U73; -.
DR Proteomes; UP000000559; Chromosome 2.
DR GO; GO:0070847; C:core mediator complex; IBA:GO_Central.
DR GO; GO:0016592; C:mediator complex; IEA:InterPro.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR019258; Mediator_Med4.
DR PANTHER; PTHR13208; PTHR13208; 1.
DR Pfam; PF10018; Med4; 1.
PE 3: Inferred from homology;
KW Activator; Coiled coil; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..323
FT /note="Mediator of RNA polymerase II transcription subunit
FT 4"
FT /id="PRO_0000302073"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 241..323
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 79..167
FT /evidence="ECO:0000255"
FT COMPBIAS 14..36
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 241..261
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 274..306
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 323 AA; 37008 MW; C78914A861ECDFF1 CRC64;
MLPFKKADSP FKSNPVSRVG SSTRLNQLGN IKSNPTTPNA ALYVTSSLNP SKNLPTNAAN
VKSRLQTQKD LDAFKQLPMV QKVNEYERLL NELSEAVSQF KNDELQEKIG QIITCNDVLK
QQIEDLNKHR NYSYEVDKLS DRNKILEENS KFILKELVSY RNELKKLPKL PKSDKMVNRN
VDVDDILKYA FKLAKFTKAP ATVANMPFQI HPNNYVWPAE DSLRRGMLAQ ASLQAEEIIR
HELGETDKEN SNEVKTESKV DHDDDDDDEM EDVRISNENT NDEQRSKPPA ASEHDTSKRK
EEQNQQPVDL NLDLFDPDDE YSD