MED8_CAEBR
ID MED8_CAEBR Reviewed; 294 AA.
AC P0C5E6; A8WTC1; E3CTW6; Q620C1;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 09-FEB-2010, sequence version 2.
DT 25-MAY-2022, entry version 57.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 8;
DE AltName: Full=Mediator complex subunit 8;
GN ORFNames=CBG29108 {ECO:0000312|WormBase:CBG29108};
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Component of the Mediator complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 8 family.
CC {ECO:0000305}.
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DR EMBL; HE601438; CBX33037.1; -; Genomic_DNA.
DR AlphaFoldDB; P0C5E6; -.
DR SMR; P0C5E6; -.
DR STRING; 6238.CBG29108; -.
DR WormBase; CBG29108; CBP47985; WBGene00194889; -.
DR eggNOG; KOG3583; Eukaryota.
DR HOGENOM; CLU_799832_0_0_1; -.
DR InParanoid; P0C5E6; -.
DR OMA; QEEVEWP; -.
DR Proteomes; UP000008549; Chromosome II.
DR GO; GO:0070847; C:core mediator complex; IBA:GO_Central.
DR GO; GO:0016592; C:mediator complex; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR019364; Mediatior_Med8_fun/met.
DR PANTHER; PTHR13074; PTHR13074; 1.
DR Pfam; PF10232; Med8; 1.
PE 3: Inferred from homology;
KW Activator; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..294
FT /note="Mediator of RNA polymerase II transcription subunit
FT 8"
FT /id="PRO_0000304610"
FT REGION 216..249
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 262..294
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 229..249
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 294 AA; 32869 MW; 4E13F0186F373A05 CRC64;
MDFPFQAPIP PLTANYQSEP EKIGQATDMM IKRVTDAKKM IEELLQMLDL QEKCPWPDML
EKFSSLASAM ASLQTSVRKS GLPHGHEDHG QFLRSHVLVP QRLQYEPDEA LLRVTQGRVF
SWNHELVPEY LRTKPNPEME NEEQMLDMER SAKAPDLVVK QIAAYNKNIE GLLGSLSNID
RLHSEAIIEK PTHSREETMK LVKSILLGEA IRTLRTAGAP PTSTPMPAAP GSAGPSQSGS
QVMNQAPGMQ DYQNPQLRQQ LMGQPPQMGY GNAYPPQYPQ MHPQQMGELS GNSF