MED8_DANRE
ID MED8_DANRE Reviewed; 267 AA.
AC Q6NYT1;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 8;
DE AltName: Full=Mediator complex subunit 8;
GN Name=med8; ORFNames=zgc:76877;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC the regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors. May play a role as a target
CC recruitment subunit in E3 ubiquitin-protein ligase complexes and thus
CC in ubiquitination and subsequent proteasomal degradation of target
CC proteins (By similarity). {ECO:0000250}.
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC -!- SUBUNIT: Component of the Mediator complex. May be part of a
CC multisubunit E3 ubiquitin-protein ligase complex (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 8 family.
CC {ECO:0000305}.
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DR EMBL; BC066472; AAH66472.1; -; mRNA.
DR RefSeq; NP_996966.1; NM_207083.1.
DR AlphaFoldDB; Q6NYT1; -.
DR SMR; Q6NYT1; -.
DR STRING; 7955.ENSDARP00000027433; -.
DR PaxDb; Q6NYT1; -.
DR GeneID; 404615; -.
DR KEGG; dre:404615; -.
DR CTD; 112950; -.
DR ZFIN; ZDB-GENE-040426-2091; med8.
DR eggNOG; KOG3583; Eukaryota.
DR InParanoid; Q6NYT1; -.
DR OrthoDB; 1392867at2759; -.
DR PhylomeDB; Q6NYT1; -.
DR Reactome; R-DRE-212436; Generic Transcription Pathway.
DR UniPathway; UPA00143; -.
DR PRO; PR:Q6NYT1; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0070847; C:core mediator complex; IBA:GO_Central.
DR GO; GO:0016592; C:mediator complex; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR019364; Mediatior_Med8_fun/met.
DR PANTHER; PTHR13074; PTHR13074; 1.
DR Pfam; PF10232; Med8; 1.
PE 2: Evidence at transcript level;
KW Activator; Coiled coil; Nucleus; Reference proteome; Transcription;
KW Transcription regulation; Ubl conjugation pathway.
FT CHAIN 1..267
FT /note="Mediator of RNA polymerase II transcription subunit
FT 8"
FT /id="PRO_0000304525"
FT REGION 156..180
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 227..267
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 2..27
FT /evidence="ECO:0000255"
FT COILED 118..163
FT /evidence="ECO:0000255"
FT COMPBIAS 245..267
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 267 AA; 29402 MW; 330278074132AFAF CRC64;
MQQREEKQLE AFLESLVARV AHLKGSLQSF IYKLENEYDR LTWPSVLDNF ALISGQLNTI
NKLLRNEKTP SYKSQVIIPL LLSPDRDEEL AKLTEHRVPV FSHEIVPDHL RTKPDPEVEE
QEKHLSAEAA RIGPEVAQKQ IQALNKLCSN LLEKLNNPRE DRDSETSALR QNKPSFNPAD
TNALVAAVGF GKGLSKCRPP GPVAPGHPGQ PMMQTGPTLQ QVTIAGASGH QAGMSGPVAP
QQPGQPGKIP SNIKTNIKSA SMHPYNR