ID   ARID1_ARATH             Reviewed;         562 AA.
AC   Q84JT7; O82364;
DT   19-OCT-2011, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-2003, sequence version 1.
DT   25-MAY-2022, entry version 101.
DE   RecName: Full=AT-rich interactive domain-containing protein 1;
DE            Short=ARID domain-containing protein 1;
DE   AltName: Full=ARID and ELM2 domain-containing protein 1;
GN   Name=ARID1; OrderedLocusNames=At2g46040; ORFNames=T3F17.31;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617197; DOI=10.1038/45471;
RA   Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA   Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA   Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA   Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA   Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA   Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA   Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT   "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL   Nature 402:761-768(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00355,
CC       ECO:0000255|PROSITE-ProRule:PRU00512}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAC62899.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR   EMBL; AC005397; AAC62899.1; ALT_INIT; Genomic_DNA.
DR   EMBL; CP002685; AEC10635.1; -; Genomic_DNA.
DR   EMBL; CP002685; ANM61620.1; -; Genomic_DNA.
DR   EMBL; BT003984; AAO42024.1; -; mRNA.
DR   EMBL; BT005067; AAO50600.1; -; mRNA.
DR   PIR; A84898; A84898.
DR   RefSeq; NP_001318434.1; NM_001337174.1.
DR   RefSeq; NP_001323826.1; NM_001337175.1.
DR   RefSeq; NP_182128.2; NM_130167.2.
DR   AlphaFoldDB; Q84JT7; -.
DR   BioGRID; 4547; 2.
DR   IntAct; Q84JT7; 1.
DR   STRING; 3702.AT2G46040.1; -.
DR   iPTMnet; Q84JT7; -.
DR   PaxDb; Q84JT7; -.
DR   PRIDE; Q84JT7; -.
DR   ProteomicsDB; 246600; -.
DR   EnsemblPlants; AT2G46040.1; AT2G46040.1; AT2G46040.
DR   EnsemblPlants; AT2G46040.3; AT2G46040.3; AT2G46040.
DR   GeneID; 819212; -.
DR   Gramene; AT2G46040.1; AT2G46040.1; AT2G46040.
DR   Gramene; AT2G46040.3; AT2G46040.3; AT2G46040.
DR   KEGG; ath:AT2G46040; -.
DR   Araport; AT2G46040; -.
DR   TAIR; locus:2062959; AT2G46040.
DR   eggNOG; ENOG502QVAG; Eukaryota.
DR   HOGENOM; CLU_032356_2_0_1; -.
DR   InParanoid; Q84JT7; -.
DR   OrthoDB; 271170at2759; -.
DR   PhylomeDB; Q84JT7; -.
DR   PRO; PR:Q84JT7; -.
DR   Proteomes; UP000006548; Chromosome 2.
DR   ExpressionAtlas; Q84JT7; baseline and differential.
DR   Genevisible; Q84JT7; AT.
DR   GO; GO:0048555; C:generative cell nucleus; IDA:TAIR.
DR   GO; GO:0000118; C:histone deacetylase complex; IDA:TAIR.
DR   GO; GO:0048556; C:microsporocyte nucleus; IDA:TAIR.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016575; P:histone deacetylation; IMP:TAIR.
DR   GO; GO:0048235; P:pollen sperm cell differentiation; IMP:TAIR.
DR   GO; GO:0010628; P:positive regulation of gene expression; IPI:TAIR.
DR   Gene3D; 1.10.150.60; -; 1.
DR   InterPro; IPR001606; ARID_dom.
DR   InterPro; IPR036431; ARID_dom_sf.
DR   InterPro; IPR000949; ELM2_dom.
DR   Pfam; PF01388; ARID; 1.
DR   SMART; SM00501; BRIGHT; 1.
DR   SMART; SM01189; ELM2; 1.
DR   SUPFAM; SSF46774; SSF46774; 1.
DR   PROSITE; PS51011; ARID; 1.
DR   PROSITE; PS51156; ELM2; 1.
PE   2: Evidence at transcript level;
KW   DNA-binding; Nucleus; Reference proteome; Repressor; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..562
FT                   /note="AT-rich interactive domain-containing protein 1"
FT                   /id="PRO_0000413209"
FT   DOMAIN          43..136
FT                   /note="ARID"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00355"
FT   DOMAIN          358..448
FT                   /note="ELM2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00512"
SQ   SEQUENCE   562 AA;  63315 MW;  6BF236F57AB78BDE CRC64;
     MAGWSMVADE DAVDYSKTPK SLDANRSPES VNPESTGFEK KIKELISLFR PLLDSFLAEF
     CSADGFLPLP AMTGEGRTVD LFNLFLNVTH KGGFDAVSEN GSWDEVVQES GLESYDSASA
     KLIYVKYLDA FGRWLNRVVA GDTDVSSVEL SGISDALVAR LNGFLSEVKK KYELRKGRPA
     KELGAELKWF ISKTKRRYDK HHVGKESASN DAVKEFQGSK LAERRLEQIM ILESVTQECS
     SPGKRKRECP LETLKWLSDV AKDPCDPSLG IVPDRSEWVS YGSEEPWKQL LLFRASRTNN
     DSACEKTWQK VQKMHPCLYD DSAGASYNLR ERLSYEDYKR GKTGNGSDIG SSDEEDRPCA
     LVGSKFQAKV PEWTGITPES DSKWLGTRIW PLTKEQTKAN LLIERDRIGK GRQDPCGCHN
     PGSIECVKFH ITAKRDKLKL ELGPAFYMWC FDVMGECTLQ YWTDLELKKI KSLMSSPPSL
     SPAFIHQAKM ILPSKSRGKI VSYFYNVTLL QYRASQSRIT PHDIDSDTDQ IFLRATENEN
     PAPEANTFQK PALLSPNKKR CR