MFD6A_DANRE
ID MFD6A_DANRE Reviewed; 793 AA.
AC Q1LUQ4;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 30-MAY-2006, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Major facilitator superfamily domain-containing protein 6-A;
DE AltName: Full=Macrophage MHC class I receptor 2 homolog A;
GN Name=mfsd6a; Synonyms=mfsd6, mmr2; ORFNames=si:dkey-188p4.2;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the major facilitator superfamily. MFSD6 family.
CC {ECO:0000305}.
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DR EMBL; BX927260; CAK05334.1; -; Genomic_DNA.
DR RefSeq; NP_001076525.1; NM_001083056.1.
DR RefSeq; XP_005161736.1; XM_005161679.3.
DR AlphaFoldDB; Q1LUQ4; -.
DR STRING; 7955.ENSDARP00000063028; -.
DR PaxDb; Q1LUQ4; -.
DR Ensembl; ENSDART00000063029; ENSDARP00000063028; ENSDARG00000032318.
DR GeneID; 100034426; -.
DR KEGG; dre:100034426; -.
DR CTD; 100034426; -.
DR ZFIN; ZDB-GENE-050208-335; mfsd6a.
DR eggNOG; KOG3762; Eukaryota.
DR GeneTree; ENSGT00530000063599; -.
DR HOGENOM; CLU_013133_2_0_1; -.
DR InParanoid; Q1LUQ4; -.
DR OMA; PKKAYVH; -.
DR OrthoDB; 628784at2759; -.
DR PhylomeDB; Q1LUQ4; -.
DR TreeFam; TF314366; -.
DR PRO; PR:Q1LUQ4; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 22.
DR Bgee; ENSDARG00000032318; Expressed in intestine and 19 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0042590; P:antigen processing and presentation of exogenous peptide antigen via MHC class I; IBA:GO_Central.
DR Gene3D; 1.20.1250.20; -; 3.
DR InterPro; IPR024989; MFS_assoc_dom.
DR InterPro; IPR036259; MFS_trans_sf.
DR Pfam; PF12832; MFS_1_like; 1.
DR SUPFAM; SSF103473; SSF103473; 1.
PE 3: Inferred from homology;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..793
FT /note="Major facilitator superfamily domain-containing
FT protein 6-A"
FT /id="PRO_0000321943"
FT TRANSMEM 75..95
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 107..127
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 134..154
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 297..317
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 340..360
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 380..400
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 461..481
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 489..509
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 555..575
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 590..610
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 616..636
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 28..53
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 170..195
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 239..288
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 412..434
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 674..699
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 734..793
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 29..53
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 747..793
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 793 AA; 88232 MW; BE0E5BDD351F6E1D CRC64;
MADDRVAILT EDEEELKRKH LERFDRLSLE IQSPSQPPEN DVPNDTAPTP SPQHELSCCE
RLFLRVNRHL LVSKVFYLFF YAAYGSLHPL LALYYKQLGM NPTQSGLLVG IRYFIEFCSA
PFWGIVADRY RKGKAVLLFS MLCWILFNAG IGIVKPPIMA CKEETIPTTT KVPTVHPTPS
NETFFPNTSS TSQMRRRRDL IGQYPWRTIL SSGQSSGYIS EHRIKRDSNL SFTPAPEELA
NTTQTNQTST TTQPKPSTSI STSTPSSTNT TSSSTTKSTT TNPNLPPPEY NMDQVNAIFL
LILLVIIIGE FFSAPAITIV DTVTLHYLGP HRDRYGLQRM WGSLGWGLAM LCIGIWIDHT
STNLIIGNME CIMKNYKNYH IAFIVFGVLM VIALIVATQF KFDVQHHDTN EGQEVGNQQE
NVQPRGSPGT RSTDTPTIVQ AEEFHFWDLM RLLCGVQYST VLFVAWFMGF GYGFVFTFLY
WHLQDLTGTT TLFGICSVLS HVSELAAYFT SHKFIELVGH IRVLYIGLAC NTARYLYISY
LENAWTVLPM EVLQGITHAS VWAACISYLS AAVPPPLRTS AQGILQGLHL GLGRGCGAMV
GGIFVNYFGV AETFRGIGMA SLVILLIFSL IMYITGQNEK KEDKMLAENI PIPSSPVPIA
TIDLVQNTAD VAAPARPEPK LPARKTQHQQ EQEDLNKPAW VPSGSPWVSV ALLVYQIREM
VLLAKARPTV EVQPLQGTDE VRSDSQEDQS PPVFSDAVQN ENTPSGLQDH SGSPTAQLDV
PTRDTQPPSQ HIS