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MFTD_MYCS2
ID   MFTD_MYCS2              Reviewed;         399 AA.
AC   A0QSB9;
DT   10-FEB-2021, integrated into UniProtKB/Swiss-Prot.
DT   09-JAN-2007, sequence version 1.
DT   03-AUG-2022, entry version 102.
DE   RecName: Full=Pre-mycofactocin synthase {ECO:0000305|PubMed:31381312};
DE            Short=PMFT synthase {ECO:0000305|PubMed:31381312};
DE            EC=1.4.3.26 {ECO:0000269|PubMed:31381312};
GN   Name=mftD {ECO:0000303|PubMed:31381312};
GN   OrderedLocusNames=MSMEG_1424 {ECO:0000312|EMBL:ABK72067.1};
OS   Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium
OS   smegmatis).
OC   Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC   Mycolicibacterium.
OX   NCBI_TaxID=246196;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700084 / mc(2)155;
RA   Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C.,
RA   Fraser C.M.;
RL   Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   FUNCTION, AND CATALYTIC ACTIVITY.
RC   STRAIN=ATCC 700084 / mc(2)155;
RX   PubMed=31381312; DOI=10.1021/jacs.9b06102;
RA   Ayikpoe R.S., Latham J.A.;
RT   "MftD Catalyzes the Formation of a Biologically Active Redox Center in the
RT   Biosynthesis of the Ribosomally Synthesized and Post-translationally
RT   Modified Redox Cofactor Mycofactocin.";
RL   J. Am. Chem. Soc. 141:13582-13591(2019).
RN   [3]
RP   FUNCTION, AND DISRUPTION PHENOTYPE.
RC   STRAIN=ATCC 700084 / mc(2)155;
RX   PubMed=31113891; DOI=10.1128/mbio.00190-19;
RA   Krishnamoorthy G., Kaiser P., Lozza L., Hahnke K., Mollenkopf H.J.,
RA   Kaufmann S.H.E.;
RT   "Mycofactocin Is Associated with Ethanol Metabolism in Mycobacteria.";
RL   MBio 10:E00190-E00190(2019).
RN   [4]
RP   FUNCTION, AND DISRUPTION PHENOTYPE.
RC   STRAIN=ATCC 700084 / mc(2)155;
RX   PubMed=33014324; DOI=10.1039/d0sc01172j;
RA   Pena-Ortiz L., Graca A.P., Guo H., Braga D., Koellner T.G., Regestein L.,
RA   Beemelmanns C., Lackner G.;
RT   "Structure elucidation of the redox cofactor mycofactocin reveals oligo-
RT   glycosylation by MftF.";
RL   Chem. Sci. 11:5182-5190(2020).
CC   -!- FUNCTION: Involved in the biosynthesis of the enzyme cofactor
CC       mycofactocin (MFT) (PubMed:33014324). Catalyzes the oxidative
CC       deamination of AHDP (3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethyl-
CC       2-pyrrolidin-2-one), forming an alpha-keto amide moiety on the
CC       resulting molecule, which is called pre-mycofactocin (PMFT). This
CC       reaction occurs via a 5-[(4-hydroxyphenyl)methyl]-3-imino-4,4-
CC       dimethylpyrrolidin-2-one intermediate, which converts to PMFT. The
CC       alpha-keto amide moiety is the redox-active center for the redox
CC       activity of mycofactocin (PubMed:31381312). Is required for the in vivo
CC       ethanol assimilation in M.smegmatis (PubMed:31113891).
CC       {ECO:0000269|PubMed:31113891, ECO:0000269|PubMed:31381312,
CC       ECO:0000269|PubMed:33014324}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethyl-2-pyrrolidin-
CC         2-one + H2O + O2 = H2O2 + NH4(+) + pre-mycofactocin;
CC         Xref=Rhea:RHEA:65508, ChEBI:CHEBI:15377, ChEBI:CHEBI:15379,
CC         ChEBI:CHEBI:16240, ChEBI:CHEBI:28938, ChEBI:CHEBI:150862,
CC         ChEBI:CHEBI:150863; EC=1.4.3.26;
CC         Evidence={ECO:0000269|PubMed:31381312};
CC   -!- COFACTOR:
CC       Name=FMN; Xref=ChEBI:CHEBI:58210;
CC         Evidence={ECO:0000250|UniProtKB:A0PM50};
CC   -!- DISRUPTION PHENOTYPE: Cells lacking this gene lose the ability to
CC       utilize ethanol as the sole growth substrate (PubMed:31113891). They
CC       are unable to produce PMFT(H2) and glycosylated (methyl)MFT(H2), and
CC       accumulate AHDP and glycosylated AHDP (PubMed:33014324).
CC       {ECO:0000269|PubMed:31113891, ECO:0000269|PubMed:33014324}.
CC   -!- SIMILARITY: Belongs to the FMN-dependent alpha-hydroxy acid
CC       dehydrogenase family. {ECO:0000305}.
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DR   EMBL; CP000480; ABK72067.1; -; Genomic_DNA.
DR   RefSeq; YP_885807.1; NC_008596.1.
DR   AlphaFoldDB; A0QSB9; -.
DR   SMR; A0QSB9; -.
DR   STRING; 246196.MSMEI_1389; -.
DR   PRIDE; A0QSB9; -.
DR   EnsemblBacteria; ABK72067; ABK72067; MSMEG_1424.
DR   KEGG; msm:MSMEG_1424; -.
DR   PATRIC; fig|246196.19.peg.1411; -.
DR   eggNOG; COG1304; Bacteria.
DR   OMA; AWSWEKI; -.
DR   BRENDA; 1.4.3.26; 3512.
DR   Proteomes; UP000000757; Chromosome.
DR   GO; GO:0010181; F:FMN binding; IEA:InterPro.
DR   GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR   CDD; cd02809; alpha_hydroxyacid_oxid_FMN; 1.
DR   Gene3D; 3.20.20.70; -; 1.
DR   InterPro; IPR013785; Aldolase_TIM.
DR   InterPro; IPR012133; Alpha-hydoxy_acid_DH_FMN.
DR   InterPro; IPR000262; FMN-dep_DH.
DR   InterPro; IPR037396; FMN_HAD.
DR   InterPro; IPR023989; MftD.
DR   Pfam; PF01070; FMN_dh; 1.
DR   PIRSF; PIRSF000138; Al-hdrx_acd_dh; 1.
DR   TIGRFAMs; TIGR03966; actino_HemFlav; 1.
DR   PROSITE; PS51349; FMN_HYDROXY_ACID_DH_2; 1.
PE   1: Evidence at protein level;
KW   Flavoprotein; FMN; Oxidoreductase; Reference proteome.
FT   CHAIN           1..399
FT                   /note="Pre-mycofactocin synthase"
FT                   /id="PRO_0000452053"
FT   DOMAIN          4..386
FT                   /note="FMN hydroxy acid dehydrogenase"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00683"
FT   ACT_SITE        281
FT                   /note="Proton acceptor"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00683"
FT   BINDING         111
FT                   /ligand="FMN"
FT                   /ligand_id="ChEBI:CHEBI:58210"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00683"
FT   BINDING         131
FT                   /ligand="FMN"
FT                   /ligand_id="ChEBI:CHEBI:58210"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00683"
FT   BINDING         133
FT                   /ligand="a 2-oxocarboxylate"
FT                   /ligand_id="ChEBI:CHEBI:35179"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00683"
FT   BINDING         159
FT                   /ligand="FMN"
FT                   /ligand_id="ChEBI:CHEBI:58210"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00683"
FT   BINDING         168
FT                   /ligand="a 2-oxocarboxylate"
FT                   /ligand_id="ChEBI:CHEBI:35179"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00683"
FT   BINDING         257
FT                   /ligand="FMN"
FT                   /ligand_id="ChEBI:CHEBI:58210"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00683"
FT   BINDING         312..316
FT                   /ligand="FMN"
FT                   /ligand_id="ChEBI:CHEBI:58210"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00683"
FT   BINDING         335..336
FT                   /ligand="FMN"
FT                   /ligand_id="ChEBI:CHEBI:58210"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00683"
SQ   SEQUENCE   399 AA;  42774 MW;  68E90B93376382AE CRC64;
     MNMARDIWFE TVAIAQQRAR KRLPKSVYSS LISASEKGVT VTDNVESFAE LGFAPHVVGA
     PEKRDMATTV MGQQISLPVI ISPTGVQAVH PDGEVAVARA AAARGTAMGL SSFASKPIEE
     VVAVNDKIFF QIYWLGDRDA ILARAERAKA AGAVGLIVTT DWSFSHGRDW GSPKIPEKMD
     LKTMVTMMPE ALTKPRWLWQ WGKTMRPPNL RVPNQGARGE DGPPFFQAYG EWMGTPPPTW
     EDIAWLREQW DGPFMLKGVI RVDDAKRAVD AGVSAISVSN HGGNNLDGTP AAIRALPVIA
     EAVGDQVEVL LDGGIRRGSD VVKAVALGAR AVMIGRAYLW GLAAEGQVGV ENVLDILRGG
     IDSALMGLGR SSIHDLVPED ILVPEGFTRA LGVPPASGS
 
 
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