MIP1_ARATH
ID MIP1_ARATH Reviewed; 711 AA.
AC Q8RX22; Q9C7Y6; Q9LQK4;
DT 16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 25-MAY-2022, entry version 120.
DE RecName: Full=MND1-interacting protein 1;
DE Short=AtMIP1;
GN Name=MIP1; OrderedLocusNames=At1g32530; ORFNames=F5D14.31, T9G5.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP INTERACTION WITH MND1; HOP2 AND XRI1.
RX PubMed=19187040; DOI=10.1111/j.1365-313x.2009.03814.x;
RA Dean P.J., Siwiec T., Waterworth W.M., Schloegelhofer P., Armstrong S.J.,
RA West C.E.;
RT "A novel ATM dependant X-ray inducible gene is essential for both plant
RT meiosis and gametogenesis.";
RL Plant J. 58:791-802(2009).
CC -!- SUBUNIT: Interacts (via C-terminal domain) with MND1 and HOP2.
CC Interacts with XRI1 (via C-terminal domain).
CC {ECO:0000269|PubMed:19187040}.
CC -!- INTERACTION:
CC Q8RX22; Q8GYD2: MND1; NbExp=2; IntAct=EBI-2270543, EBI-1554720;
CC Q8RX22; Q6NLW5: XRI1; NbExp=2; IntAct=EBI-2270543, EBI-2270660;
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF81351.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC007767; AAF81351.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC055769; AAG51242.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE31497.1; -; Genomic_DNA.
DR EMBL; AY090954; AAM14000.1; -; mRNA.
DR EMBL; AY133855; AAM91789.1; -; mRNA.
DR PIR; G86450; G86450.
DR RefSeq; NP_174531.1; NM_102988.5.
DR AlphaFoldDB; Q8RX22; -.
DR SMR; Q8RX22; -.
DR BioGRID; 25381; 4.
DR DIP; DIP-54876N; -.
DR IntAct; Q8RX22; 4.
DR STRING; 3702.AT1G32530.1; -.
DR iPTMnet; Q8RX22; -.
DR PaxDb; Q8RX22; -.
DR PRIDE; Q8RX22; -.
DR ProteomicsDB; 237114; -.
DR EnsemblPlants; AT1G32530.1; AT1G32530.1; AT1G32530.
DR GeneID; 840147; -.
DR Gramene; AT1G32530.1; AT1G32530.1; AT1G32530.
DR KEGG; ath:AT1G32530; -.
DR Araport; AT1G32530; -.
DR TAIR; locus:2033765; AT1G32530.
DR eggNOG; ENOG502QVIE; Eukaryota.
DR HOGENOM; CLU_012143_0_0_1; -.
DR InParanoid; Q8RX22; -.
DR OMA; SEKEINC; -.
DR OrthoDB; 998412at2759; -.
DR PhylomeDB; Q8RX22; -.
DR PRO; PR:Q8RX22; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q8RX22; baseline and differential.
DR Genevisible; Q8RX22; AT.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 1: Evidence at protein level;
KW Coiled coil; Metal-binding; Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..711
FT /note="MND1-interacting protein 1"
FT /id="PRO_0000376837"
FT ZN_FING 653..697
FT /note="RING-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00175"
FT REGION 552..571
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 602..622
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 390..648
FT /evidence="ECO:0000255"
FT COMPBIAS 607..622
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 711 AA; 79328 MW; 1DDF44ADFBCC975F CRC64;
MGCTVREKHV KPTRRIKAAA FRSDPPLCWV EKIAMSQSIV ENLVYHPGLT DSGSVNLNSV
TENPEENFWA YCTEEHLEEI LLKHLEFLYN QAVSKLLELG YEERVALKAV LSNGHCYGEL
DVLTNIVNNS LSYLNSGGGG GGSNGNGEDR TETGFTDLRD LEEYSLAGMI YLLQQVKPNL
SKGDAMWCLL MSELHVGRAS TLDVPTNRSS CCTKEDSNVE DVGTGGTLDI AGFMAPALCR
FHGGWGFGNG GGPEFSGNGF SMKGAELKLQ REIDCPKRFN LSPSMKSLLK RNVAAFAAGY
RASMKQKQIQ SSDTIGDSKA CNDPAIVKSC GQQPRKSGSE ESVSTVLEKF RDLNLDDNLE
SVGVDDKDCV IVDLLHQVKD FEKKVKERKE WAQKNAMQAA QKVSEELAEL KTLSSEREGI
QLLKKGKQAV EESTAKRFTD KEIELRKACS QNDRANVIVR KLENQNAEIR AEREGSKLSA
SESLKACMEA SKKEKKCLKK LVAWEKQILK LQDEITAEKE KIKALYKTLA QITEYEKEIE
AKWRQEQKAK EEALAQMEEE QRSKEAAEGH NKRKLETLRL KIELDFQRHK DDHQRLEQEL
GRLKASSDSD SSHISNNAWK PKKSQGENIA KLLEEIDKLE GSYDNEANYD RECIICMKDE
VSVVFLPCAH QVVCGSCSDS FFASNNGGSK VTCPCCRGLV QQRIRIFGAT S