MIPEP_RAT
ID MIPEP_RAT Reviewed; 710 AA.
AC Q01992;
DT 01-OCT-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1993, sequence version 1.
DT 03-AUG-2022, entry version 143.
DE RecName: Full=Mitochondrial intermediate peptidase;
DE Short=MIP;
DE EC=3.4.24.59;
DE Flags: Precursor;
GN Name=Mipep; Synonyms=Mip;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Liver;
RX PubMed=1518864; DOI=10.1073/pnas.89.17.8317;
RA Isaya G., Kalousek F., Rosenberg L.E.;
RT "Sequence analysis of rat mitochondrial intermediate peptidase: similarity
RT to zinc metallopeptidases and to a putative yeast homologue.";
RL Proc. Natl. Acad. Sci. U.S.A. 89:8317-8321(1992).
RN [2]
RP PROTEIN SEQUENCE OF 34-50 AND 528-542.
RC TISSUE=Liver;
RX PubMed=1322290; DOI=10.1002/j.1460-2075.1992.tb05347.x;
RA Kalousek F., Isaya G., Rosenberg L.E.;
RT "Rat liver mitochondrial intermediate peptidase (MIP): purification and
RT initial characterization.";
RL EMBO J. 11:2803-2809(1992).
CC -!- FUNCTION: Cleaves proteins, imported into the mitochondrion, to their
CC mature size.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Release of an N-terminal octapeptide as second stage of
CC processing of some proteins imported into the mitochondrion.;
CC EC=3.4.24.59;
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250};
CC Note=Binds 1 zinc ion. {ECO:0000250};
CC -!- ACTIVITY REGULATION: Activity is divalent cation-dependent. It is
CC stimulated by manganese, magnesium or calcium ions and reversibly
CC inhibited by zinc, cobalt and iron.
CC -!- SUBUNIT: Monomer.
CC -!- SUBCELLULAR LOCATION: Mitochondrion matrix.
CC -!- SIMILARITY: Belongs to the peptidase M3 family. {ECO:0000305}.
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DR EMBL; M96633; AAA41899.1; -; mRNA.
DR PIR; A46273; A46273.
DR AlphaFoldDB; Q01992; -.
DR SMR; Q01992; -.
DR STRING; 10116.ENSRNOP00000018845; -.
DR iPTMnet; Q01992; -.
DR PhosphoSitePlus; Q01992; -.
DR jPOST; Q01992; -.
DR PaxDb; Q01992; -.
DR PRIDE; Q01992; -.
DR UCSC; RGD:621680; rat.
DR RGD; 621680; Mipep.
DR eggNOG; KOG2090; Eukaryota.
DR InParanoid; Q01992; -.
DR PRO; PR:Q01992; -.
DR Proteomes; UP000002494; Unplaced.
DR GO; GO:0005759; C:mitochondrial matrix; IDA:RGD.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0004175; F:endopeptidase activity; IDA:RGD.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004222; F:metalloendopeptidase activity; IBA:GO_Central.
DR GO; GO:0006518; P:peptide metabolic process; IBA:GO_Central.
DR GO; GO:0006627; P:protein processing involved in protein targeting to mitochondrion; IBA:GO_Central.
DR GO; GO:0006508; P:proteolysis; IBA:GO_Central.
DR Gene3D; 1.10.1370.10; -; 1.
DR Gene3D; 3.40.390.10; -; 1.
DR InterPro; IPR024079; MetalloPept_cat_dom_sf.
DR InterPro; IPR024077; Neurolysin/TOP_dom2.
DR InterPro; IPR045090; Pept_M3A_M3B.
DR InterPro; IPR001567; Pept_M3A_M3B_dom.
DR PANTHER; PTHR11804; PTHR11804; 2.
DR Pfam; PF01432; Peptidase_M3; 1.
DR PROSITE; PS00142; ZINC_PROTEASE; 1.
PE 1: Evidence at protein level;
KW Acetylation; Calcium; Cobalt; Direct protein sequencing; Hydrolase; Iron;
KW Magnesium; Manganese; Metal-binding; Metalloprotease; Mitochondrion;
KW Protease; Reference proteome; Transit peptide; Zinc.
FT TRANSIT 1..33
FT /note="Mitochondrion"
FT /evidence="ECO:0000269|PubMed:1322290"
FT CHAIN 34..710
FT /note="Mitochondrial intermediate peptidase"
FT /id="PRO_0000028580"
FT ACT_SITE 493
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10095"
FT BINDING 492
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10095"
FT BINDING 496
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10095"
FT BINDING 499
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10095"
FT MOD_RES 124
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000250|UniProtKB:Q99797"
SQ SEQUENCE 710 AA; 80674 MW; 4FC2E6743EA43558 CRC64;
MLLAAGTRYA YRLCGRRAAA ALQGRAGRSC ARSVSTSWSP VGAAFNVKPQ GHLWDLLGER
RGLFGVPELS TPEGFQVAQE EALRKTEWLV ERACSTPPGP QTVLIFDELS DCLCRVADLA
DFVKIGHPEQ AFREAAQEAC RSIGTMVEKL NTNVELYQSL QKLLDDKKLM DSLDAETRRV
AELFMFDFEI SGIHLDEEKR RRAVDLNVKI LDLSSAFLMG TNFPIKIQKH LLPEHIQHHF
ARDGRHLVID GLHAEASDDL VREAAYKIFL YPNADQLKCL EELLSSRDLL ANLVGYLPFP
TGPPGTIAQT PETVMQFLEK LSEKLCERTR KDFEMMQGMK TKLNPQNSEL MPWDPPYYSG
VIRAERYNIE PSLYCPFLSL GACMEGLNVL FNRLLGVTLY AEQPFKGEVW CIDVRKLAVV
HESEGLLGYI YCDFFQRANK PQQDCHFTIR GGRLKEDGSY QLPVVVLMLN LPHASRDFPT
LLTPGMMENL FHEMGHAMHS MLGRTRYQHV TGTRCPTDFA EVPSILMEYF SNDYRVVSQF
AKHYQTGQPL PKAMVSRLCE SKKVCAAAEM QLQVFYAALD QIYHGQHPLK KSTTDILMET
QEQFYGLPYV PDTAWQLRFS HLVGYGAKYY SYLMSRAVAS MVWKECFLQD PFNRAAGERY
RREMLAHGGG KEPMLMIQGM LQKCPSIDDF VDALVSDLNL DFETFFMDSK