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MK15_CAEEL
ID   MK15_CAEEL              Reviewed;         470 AA.
AC   Q11179; G8JY04; Q8T3F7;
DT   01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT   06-JUN-2002, sequence version 2.
DT   03-AUG-2022, entry version 162.
DE   RecName: Full=Mitogen-activated protein kinase 15 {ECO:0000305};
DE            EC=2.7.11.24 {ECO:0000250|UniProtKB:Q17446};
DE   AltName: Full=Swimming-induced paralysis protein 13 {ECO:0000303|PubMed:28842414};
DE            Short=SWIP-13 {ECO:0000303|PubMed:28842414};
GN   Name=mapk-15 {ECO:0000303|PubMed:28745435, ECO:0000312|WormBase:C05D10.2a};
GN   Synonyms=swip-13 {ECO:0000303|PubMed:28842414};
GN   ORFNames=C05D10.2 {ECO:0000312|WormBase:C05D10.2a};
OS   Caenorhabditis elegans.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC   Caenorhabditis.
OX   NCBI_TaxID=6239;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Bristol N2;
RX   PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG   The C. elegans sequencing consortium;
RT   "Genome sequence of the nematode C. elegans: a platform for investigating
RT   biology.";
RL   Science 282:2012-2018(1998).
RN   [2]
RP   FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND DISRUPTION
RP   PHENOTYPE.
RX   PubMed=28745435; DOI=10.1002/cm.21387;
RA   Piasecki B.P., Sasani T.A., Lessenger A.T., Huth N., Farrell S.;
RT   "MAPK-15 is a ciliary protein required for PKD-2 localization and male
RT   mating behavior in Caenorhabditis elegans.";
RL   Cytoskeleton 74:390-402(2017).
RN   [3]
RP   FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND DISRUPTION
RP   PHENOTYPE.
RX   PubMed=29021280; DOI=10.1534/genetics.117.300383;
RA   Kazatskaya A., Kuhns S., Lambacher N.J., Kennedy J.E., Brear A.G.,
RA   McManus G.J., Sengupta P., Blacque O.E.;
RT   "Primary Cilium Formation and Ciliary Protein Trafficking Is Regulated by
RT   the Atypical MAP Kinase MAPK15 in Caenorhabditis elegans and Human Cells.";
RL   Genetics 207:1423-1440(2017).
RN   [4]
RP   FUNCTION, DISRUPTION PHENOTYPE, AND MUTAGENESIS OF ARG-59.
RX   PubMed=28842414; DOI=10.1523/jneurosci.1582-17.2017;
RA   Bermingham D.P., Hardaway J.A., Refai O., Marks C.R., Snider S.L.,
RA   Sturgeon S.M., Spencer W.C., Colbran R.J., Miller D.M. III, Blakely R.D.;
RT   "The Atypical MAP Kinase SWIP-13/ERK8 Regulates Dopamine Transporters
RT   through a Rho-Dependent Mechanism.";
RL   J. Neurosci. 37:9288-9304(2017).
RN   [5]
RP   FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE,
RP   AND MUTAGENESIS OF LYS-42; 185-TRP--TYR-470; ASP-203 AND 342-TYR--ILE-345.
RX   PubMed=29879119; DOI=10.1371/journal.pgen.1007435;
RA   McLachlan I.G., Beets I., de Bono M., Heiman M.G.;
RT   "A neuronal MAP kinase constrains growth of a Caenorhabditis elegans
RT   sensory dendrite throughout the life of the organism.";
RL   PLoS Genet. 14:E1007435-E1007435(2018).
CC   -!- FUNCTION: Atypical MAPK protein. Regulates primary cilium formation in
CC       sensory neurons and the localization of ciliary proteins involved in
CC       cilium structure, transport, and signaling (PubMed:29021280,
CC       PubMed:28745435). Acts in dopamine (DA) neurons to support synaptic
CC       membrane dat-1 availability via activation of rho-1 thereby sustaining
CC       normal levels of DA clearance (PubMed:28842414). Plays a role in male
CC       mating behavior, probably in part through regulating the localization
CC       of the polycystin pkd-2 (PubMed:28745435). Functions postembryonically
CC       in the URX sensory neurons to constrain URX dendrite growth throughout
CC       lifetime, probably by restricting expansion of the subcellular sensory
CC       compartment at the dendrite ending (PubMed:29879119).
CC       {ECO:0000269|PubMed:28745435, ECO:0000269|PubMed:28842414,
CC       ECO:0000269|PubMed:29021280, ECO:0000269|PubMed:29879119}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-
CC         [protein]; Xref=Rhea:RHEA:17989, Rhea:RHEA-COMP:9863, Rhea:RHEA-
CC         COMP:11604, ChEBI:CHEBI:15378, ChEBI:CHEBI:29999, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:83421, ChEBI:CHEBI:456216; EC=2.7.11.24;
CC         Evidence={ECO:0000250|UniProtKB:Q17446};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-
CC         threonyl-[protein]; Xref=Rhea:RHEA:46608, Rhea:RHEA-COMP:11060,
CC         Rhea:RHEA-COMP:11605, ChEBI:CHEBI:15378, ChEBI:CHEBI:30013,
CC         ChEBI:CHEBI:30616, ChEBI:CHEBI:61977, ChEBI:CHEBI:456216;
CC         EC=2.7.11.24; Evidence={ECO:0000250|UniProtKB:Q17446};
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000250|UniProtKB:Q17446};
CC   -!- ACTIVITY REGULATION: Activated by threonine and tyrosine
CC       phosphorylation. {ECO:0000250|UniProtKB:Q17446}.
CC   -!- SUBCELLULAR LOCATION: Cell projection, dendrite
CC       {ECO:0000269|PubMed:29879119}. Note=Enriched localization at the URX
CC       dendrite ending. {ECO:0000269|PubMed:29879119}.
CC   -!- SUBCELLULAR LOCATION: [Isoform a]: Perikaryon
CC       {ECO:0000269|PubMed:28745435}. Cell projection, dendrite
CC       {ECO:0000269|PubMed:28745435}. Cell projection, cilium
CC       {ECO:0000269|PubMed:28745435, ECO:0000269|PubMed:29021280}. Cell
CC       projection, cilium membrane {ECO:0000269|PubMed:28745435}. Cytoplasm,
CC       cytoskeleton, cilium axoneme {ECO:0000269|PubMed:29021280}. Cytoplasm,
CC       cytoskeleton, cilium basal body {ECO:0000269|PubMed:29021280}. Cell
CC       junction {ECO:0000269|PubMed:29021280}.
CC   -!- SUBCELLULAR LOCATION: [Isoform c]: Perikaryon
CC       {ECO:0000269|PubMed:28745435}. Cell projection, dendrite
CC       {ECO:0000269|PubMed:28745435}. Cell projection, cilium
CC       {ECO:0000269|PubMed:28745435, ECO:0000269|PubMed:29021280}. Cell
CC       projection, cilium membrane {ECO:0000269|PubMed:28745435}. Cytoplasm,
CC       cytoskeleton, cilium axoneme {ECO:0000269|PubMed:29021280}. Cytoplasm,
CC       cytoskeleton, cilium basal body {ECO:0000269|PubMed:29021280}. Cell
CC       junction {ECO:0000269|PubMed:29021280}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=3;
CC       Name=a {ECO:0000312|WormBase:C05D10.2a};
CC         IsoId=Q11179-1; Sequence=Displayed;
CC       Name=b {ECO:0000312|WormBase:C05D10.2b};
CC         IsoId=Q11179-2; Sequence=VSP_059128;
CC       Name=c {ECO:0000312|WormBase:C05D10.2c};
CC         IsoId=Q11179-3; Sequence=VSP_059129, VSP_059130;
CC   -!- TISSUE SPECIFICITY: Expressed in the URX neuron and in many other head
CC       sensory neurons (PubMed:29879119). Isoform a: Expressed in head and
CC       tail ciliated sensory neurons, and in mid-body neurons. Isoform c:
CC       Expressed in head and tail ciliated sensory neurons, and in mid-body
CC       neurons. {ECO:0000269|PubMed:28745435, ECO:0000269|PubMed:29021280,
CC       ECO:0000269|PubMed:29879119}.
CC   -!- DEVELOPMENTAL STAGE: Expressed in all larval stages.
CC       {ECO:0000269|PubMed:29879119}.
CC   -!- DOMAIN: The TXY motif contains the threonine and tyrosine residues
CC       whose phosphorylation activates the MAP kinases.
CC       {ECO:0000250|UniProtKB:Q17446}.
CC   -!- PTM: Dually phosphorylated on Thr-178 and Tyr-180, which activates the
CC       enzyme. {ECO:0000250|UniProtKB:Q17446}.
CC   -!- DISRUPTION PHENOTYPE: Viable, but males display irregular mating
CC       behavior (PubMed:28745435). Ciliary defects in ciliated sensory neurons
CC       include impaired extension of dendrites, and abnormal amphid and
CC       phasmid sensillum morphology (PubMed:28745435, PubMed:29021280).
CC       Homozygotes present the swimming-induced paralysis (Swip) phenotype
CC       (PubMed:28842414). {ECO:0000269|PubMed:28745435,
CC       ECO:0000269|PubMed:28842414, ECO:0000269|PubMed:29021280}.
CC   -!- SIMILARITY: Belongs to the protein kinase superfamily. CMGC Ser/Thr
CC       protein kinase family. MAP kinase subfamily. {ECO:0000305}.
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DR   EMBL; FO080362; CCD63173.1; -; Genomic_DNA.
DR   EMBL; BX284603; CCD63174.1; -; Genomic_DNA.
DR   EMBL; BX284603; CCD63175.1; -; Genomic_DNA.
DR   PIR; H88473; H88473.
DR   RefSeq; NP_741165.1; NM_171144.4. [Q11179-1]
DR   RefSeq; NP_741166.1; NM_171145.4.
DR   RefSeq; NP_741167.1; NM_171146.3.
DR   AlphaFoldDB; Q11179; -.
DR   SMR; Q11179; -.
DR   BioGRID; 41078; 4.
DR   STRING; 6239.C05D10.2a; -.
DR   PaxDb; Q11179; -.
DR   PeptideAtlas; Q11179; -.
DR   EnsemblMetazoa; C05D10.2a.1; C05D10.2a.1; WBGene00015478. [Q11179-1]
DR   GeneID; 175857; -.
DR   KEGG; cel:CELE_C05D10.2; -.
DR   UCSC; C05D10.2c; c. elegans. [Q11179-1]
DR   CTD; 175857; -.
DR   WormBase; C05D10.2a; CE29020; WBGene00015478; mapk-15. [Q11179-1]
DR   WormBase; C05D10.2b; CE30421; WBGene00015478; mapk-15. [Q11179-2]
DR   WormBase; C05D10.2c; CE30422; WBGene00015478; mapk-15. [Q11179-3]
DR   eggNOG; KOG0660; Eukaryota.
DR   GeneTree; ENSGT00940000159758; -.
DR   InParanoid; Q11179; -.
DR   OMA; PDQEWTR; -.
DR   OrthoDB; 741207at2759; -.
DR   PhylomeDB; Q11179; -.
DR   PRO; PR:Q11179; -.
DR   Proteomes; UP000001940; Chromosome III.
DR   Bgee; WBGene00015478; Expressed in pharyngeal muscle cell (C elegans) and 3 other tissues.
DR   GO; GO:0005930; C:axoneme; IDA:UniProtKB.
DR   GO; GO:0005911; C:cell-cell junction; IDA:UniProtKB.
DR   GO; GO:0036064; C:ciliary basal body; IDA:UniProtKB.
DR   GO; GO:0060170; C:ciliary membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0043204; C:perikaryon; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004707; F:MAP kinase activity; IBA:GO_Central.
DR   GO; GO:0106310; F:protein serine kinase activity; IEA:RHEA.
DR   GO; GO:0004674; F:protein serine/threonine kinase activity; IBA:GO_Central.
DR   GO; GO:0007610; P:behavior; IEA:UniProtKB-KW.
DR   GO; GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.
DR   GO; GO:0090494; P:dopamine uptake; IDA:UniProtKB.
DR   GO; GO:0035556; P:intracellular signal transduction; IBA:GO_Central.
DR   GO; GO:1904491; P:protein localization to ciliary transition zone; IMP:UniProtKB.
DR   GO; GO:0006468; P:protein phosphorylation; IEA:InterPro.
DR   GO; GO:1902017; P:regulation of cilium assembly; IMP:UniProtKB.
DR   InterPro; IPR011009; Kinase-like_dom_sf.
DR   InterPro; IPR003527; MAP_kinase_CS.
DR   InterPro; IPR000719; Prot_kinase_dom.
DR   InterPro; IPR017441; Protein_kinase_ATP_BS.
DR   InterPro; IPR008271; Ser/Thr_kinase_AS.
DR   Pfam; PF00069; Pkinase; 1.
DR   SMART; SM00220; S_TKc; 1.
DR   SUPFAM; SSF56112; SSF56112; 1.
DR   PROSITE; PS01351; MAPK; 1.
DR   PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
DR   PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
DR   PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
PE   1: Evidence at protein level;
KW   Alternative splicing; ATP-binding; Behavior; Cell junction; Cell membrane;
KW   Cell projection; Cilium biogenesis/degradation; Cytoplasm; Cytoskeleton;
KW   Kinase; Membrane; Nucleotide-binding; Phosphoprotein; Reference proteome;
KW   Serine/threonine-protein kinase; Transferase.
FT   CHAIN           1..470
FT                   /note="Mitogen-activated protein kinase 15"
FT                   /evidence="ECO:0000305"
FT                   /id="PRO_0000186307"
FT   DOMAIN          13..306
FT                   /note="Protein kinase"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   REGION          362..445
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOTIF           178..180
FT                   /note="TXY"
FT   COMPBIAS        380..414
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        425..440
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   ACT_SITE        137
FT                   /note="Proton acceptor"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159,
FT                   ECO:0000255|PROSITE-ProRule:PRU10027"
FT   BINDING         19..27
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   BINDING         42
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   MOD_RES         178
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:Q17446"
FT   MOD_RES         180
FT                   /note="Phosphotyrosine"
FT                   /evidence="ECO:0000250|UniProtKB:Q17446"
FT   VAR_SEQ         87..470
FT                   /note="Missing (in isoform b)"
FT                   /evidence="ECO:0000305"
FT                   /id="VSP_059128"
FT   VAR_SEQ         363..367
FT                   /note="YGEDK -> VVRRR (in isoform c)"
FT                   /evidence="ECO:0000305"
FT                   /id="VSP_059129"
FT   VAR_SEQ         368..470
FT                   /note="Missing (in isoform c)"
FT                   /evidence="ECO:0000305"
FT                   /id="VSP_059130"
FT   MUTAGEN         42
FT                   /note="K->A: Causes URX dendrite overgrowth."
FT                   /evidence="ECO:0000269|PubMed:29879119"
FT   MUTAGEN         59
FT                   /note="R->Q: In vt32; loss of function allele that displays
FT                   reserpine-sensitive swimming-induced paralysis phenotype."
FT                   /evidence="ECO:0000269|PubMed:28842414"
FT   MUTAGEN         185..470
FT                   /note="Missing: In hmn5; overgrowth of URX dendrite,
FT                   extending up to 150% of its normal length, making a U-turn
FT                   at the nose and looping back in the direction of the cell
FT                   body rather than ceasing growth at the tip of the nose,
FT                   with increasing dendrite outgrowth from larval stages to
FT                   adult animals. Rarely, starved animals exhibit ectopic
FT                   branching of the URX dendrites."
FT                   /evidence="ECO:0000269|PubMed:29879119"
FT   MUTAGEN         203
FT                   /note="D->N: In hmn51; causes URX dendrite overgrowth."
FT                   /evidence="ECO:0000269|PubMed:29879119"
FT   MUTAGEN         342..345
FT                   /note="Missing: Causes URX dendrite overgrowth."
FT                   /evidence="ECO:0000269|PubMed:29879119"
SQ   SEQUENCE   470 AA;  54039 MW;  8908B49D15173DF0 CRC64;
     MTDDVDTHIH EKFDLQKRLG KGAYGIVWKA YDKRSRETVA LKKIFDAFRN PTDSQRTFRE
     VMFLQEFGKH PNVIKLYNIF RADNDRDIYL AFEFMEADLH NVIKKGSILK DVHKQYIMCQ
     LFRAIRFLHS GNVLHRDLKP SNVLLDADCR VKLADFGLAR SLSSLEDYPE GQKMPDLTEY
     VATRWYRSPE ILLAAKRYTK GVDMWSLGCI LAEMLIGRAL FPGSSTINQI ERIMNTIAKP
     SRADIASIGS HYAASVLEKM PQRPRKPLDL IITQSQTAAI DMVQRLLIFA PQKRLTVEQC
     LVHPYVVQFH NPSEEPVLNY EVYPPLPDHI QLSIDDYRDR LYEMIDEKKA SFKRIQHEKI
     RPYGEDKSRA PIAQAECSDT DYDTARSLQR TTSMDKNNSS SHDSSSGTLR ERAASAESRT
     SKDSNGEMRN GNGNTPSSIK QRRRSVERAR LFANIKPSKI LHPHKLISNY
 
 
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