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ARMT1_MACFA
ID   ARMT1_MACFA             Reviewed;         441 AA.
AC   Q4R526;
DT   04-APR-2006, integrated into UniProtKB/Swiss-Prot.
DT   04-APR-2006, sequence version 2.
DT   03-AUG-2022, entry version 49.
DE   RecName: Full=Damage-control phosphatase ARMT1 {ECO:0000250|UniProtKB:Q04371};
DE            EC=3.1.3.- {ECO:0000250|UniProtKB:Q04371};
DE   AltName: Full=Acidic residue methyltransferase 1 {ECO:0000250|UniProtKB:Q9H993};
DE   AltName: Full=Protein-glutamate O-methyltransferase {ECO:0000250|UniProtKB:Q9H993};
DE            EC=2.1.1.- {ECO:0000250|UniProtKB:Q9H993};
DE   AltName: Full=Sugar phosphate phosphatase ARMT1 {ECO:0000250|UniProtKB:Q04371};
GN   Name=ARMT1 {ECO:0000250|UniProtKB:Q9H993};
GN   ORFNames=QflA-10880 {ECO:0000303|Ref.1};
OS   Macaca fascicularis (Crab-eating macaque) (Cynomolgus monkey).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini;
OC   Cercopithecidae; Cercopithecinae; Macaca.
OX   NCBI_TaxID=9541;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Frontal cortex;
RG   International consortium for macaque cDNA sequencing and analysis;
RT   "DNA sequences of macaque genes expressed in brain or testis and its
RT   evolutionary implications.";
RL   Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Metal-dependent phosphatase that shows phosphatase activity
CC       against several substrates, including fructose-1-phosphate and
CC       fructose-6-phosphate (By similarity). Its preference for fructose-1-
CC       phosphate, a strong glycating agent that causes DNA damage rather than
CC       a canonical yeast metabolite, suggests a damage-control function in
CC       hexose phosphate metabolism (By similarity). Has also been shown to
CC       have O-methyltransferase activity that methylates glutamate residues of
CC       target proteins to form gamma-glutamyl methyl ester residues (By
CC       similarity). Possibly methylates PCNA, suggesting it is involved in the
CC       DNA damage response (By similarity). {ECO:0000250|UniProtKB:Q04371,
CC       ECO:0000250|UniProtKB:Q9H993}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=beta-D-fructose 1-phosphate + H2O = D-fructose + phosphate;
CC         Xref=Rhea:RHEA:35603, ChEBI:CHEBI:15377, ChEBI:CHEBI:37721,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:138881;
CC         Evidence={ECO:0000250|UniProtKB:Q04371};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=beta-D-fructose 6-phosphate = D-glyceraldehyde 3-phosphate +
CC         dihydroxyacetone; Xref=Rhea:RHEA:28002, ChEBI:CHEBI:16016,
CC         ChEBI:CHEBI:57634, ChEBI:CHEBI:59776;
CC         Evidence={ECO:0000250|UniProtKB:Q04371};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=L-glutamyl-[protein] + S-adenosyl-L-methionine = [protein]-L-
CC         glutamate 5-O-methyl ester + S-adenosyl-L-homocysteine;
CC         Xref=Rhea:RHEA:24452, Rhea:RHEA-COMP:10208, Rhea:RHEA-COMP:10311,
CC         ChEBI:CHEBI:29973, ChEBI:CHEBI:57856, ChEBI:CHEBI:59789,
CC         ChEBI:CHEBI:82795; Evidence={ECO:0000250|UniProtKB:Q9H993};
CC   -!- COFACTOR:
CC       Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC         Evidence={ECO:0000250|UniProtKB:Q04371};
CC       Name=Ni(2+); Xref=ChEBI:CHEBI:49786;
CC         Evidence={ECO:0000250|UniProtKB:Q04371};
CC   -!- DOMAIN: Subfamily III proteins have a conserved RTxK motif about 40-50
CC       residues from the C-terminus; the threonine may be replaced by serine
CC       or cysteine. {ECO:0000250|UniProtKB:Q04371}.
CC   -!- PTM: Automethylated. {ECO:0000250|UniProtKB:Q9H993}.
CC   -!- SIMILARITY: Belongs to the damage-control phosphatase family. Sugar
CC       phosphate phosphatase III subfamily. {ECO:0000305}.
CC   -!- CAUTION: Human C6orf211 has been reportedly associated with a protein
CC       carboxyl methyltransferase activity, but whether this protein indeed
CC       has such an activity remains to be determined (By similarity). It has
CC       been later shown to belong to a family of metal-dependent phosphatases
CC       implicated in metabolite damage-control (By similarity).
CC       {ECO:0000250|UniProtKB:Q9H993}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAE01799.1; Type=Frameshift; Evidence={ECO:0000305};
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DR   EMBL; AB169718; BAE01799.1; ALT_FRAME; mRNA.
DR   AlphaFoldDB; Q4R526; -.
DR   SMR; Q4R526; -.
DR   STRING; 9541.XP_005552206.1; -.
DR   eggNOG; KOG3870; Eukaryota.
DR   Proteomes; UP000233100; Unplaced.
DR   GO; GO:0097023; F:fructose 6-phosphate aldolase activity; IEA:RHEA.
DR   GO; GO:0103026; F:fructose-1-phosphatase activity; IEA:RHEA.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0051998; F:protein carboxyl O-methyltransferase activity; ISS:UniProtKB.
DR   GO; GO:0008983; F:protein-glutamate O-methyltransferase activity; IEA:RHEA.
DR   GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; ISS:UniProtKB.
DR   GO; GO:0006974; P:cellular response to DNA damage stimulus; IEA:UniProtKB-KW.
DR   GO; GO:0032259; P:methylation; ISS:UniProtKB.
DR   GO; GO:2001020; P:regulation of response to DNA damage stimulus; ISS:UniProtKB.
DR   InterPro; IPR036075; ARMT-1-like_metal-bd_sf.
DR   InterPro; IPR039763; ARMT1.
DR   InterPro; IPR002791; ARMT1-like_metal-bd.
DR   PANTHER; PTHR12260; PTHR12260; 1.
DR   Pfam; PF01937; ARMT1-like_dom; 1.
DR   SUPFAM; SSF111321; SSF111321; 1.
PE   2: Evidence at transcript level;
KW   Acetylation; DNA damage; Hydrolase; Manganese; Metal-binding;
KW   Methyltransferase; Nickel; Phosphoprotein; Reference proteome;
KW   S-adenosyl-L-methionine; Transferase.
FT   INIT_MET        1
FT                   /note="Removed"
FT                   /evidence="ECO:0000250|UniProtKB:Q9H993"
FT   CHAIN           2..441
FT                   /note="Damage-control phosphatase ARMT1"
FT                   /id="PRO_0000230796"
FT   MOTIF           401..404
FT                   /note="Subfamily III RTxK motif"
FT                   /evidence="ECO:0000250|UniProtKB:Q04371"
FT   BINDING         253..254
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:Q04371"
FT   BINDING         253
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000250|UniProtKB:Q04371"
FT   BINDING         254
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000250|UniProtKB:Q04371"
FT   BINDING         258
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000250|UniProtKB:Q9H993"
FT   BINDING         291
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000250|UniProtKB:Q04371"
FT   BINDING         291
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000250|UniProtKB:Q9H993"
FT   BINDING         367..371
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:Q04371"
FT   BINDING         404
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:Q04371"
FT   MOD_RES         2
FT                   /note="N-acetylalanine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9H993"
FT   MOD_RES         40
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9H993"
FT   MOD_RES         102
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9H993"
SQ   SEQUENCE   441 AA;  51207 MW;  351482D6BA80C860 CRC64;
     MAVVPASLSG QDVGSFAYLT IKDRIPQILT KVIDTLHRHK SEFFENHGEE GVEAEKKAIS
     LLSKLRNELQ TDKPIIPLVE KFVDTDIWNQ YLEYQQSLLN ESDGKSRWFY SPWLFVECYM
     YRRIHEAIIQ SPPIDYFDVF KESKEQNFYE SQESVIALCT HLQQLIKTIE DLDENQLKDE
     FFKLLQISLW GNKCDLSLSG GESSSQKTDV LNSLEDLKPF ILLNDMEHLW SLLSNCKKTR
     EKASVTRVYI VLDNSGFELV TDLILANFLL SSELATEVHF YGKTIPWFVS DTTIHDFNWL
     IEQVKHGNHK WMSKCGADWE EYVKMGKWVY HDHIFWTLPH EYCAMPQVAP DLYAELQKAH
     LILFKGDLNY RKLTGDRKWE FSVPFHQALN GFHPAPLCTI RTLKAEIQVG LKPGQGEQLM
     ASEPCWWTSG KYGIFQYDGP L
 
 
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