MNMG_BRADU
ID MNMG_BRADU Reviewed; 626 AA.
AC Q89WP5;
DT 08-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129};
DE AltName: Full=Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129};
GN Name=mnmG {ECO:0000255|HAMAP-Rule:MF_00129};
GN Synonyms=gidA {ECO:0000255|HAMAP-Rule:MF_00129}; OrderedLocusNames=bll0633;
OS Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 /
OS NBRC 14792 / USDA 110).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bradyrhizobiaceae; Bradyrhizobium.
OX NCBI_TaxID=224911;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110;
RX PubMed=12597275; DOI=10.1093/dnares/9.6.189;
RA Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S.,
RA Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M.,
RA Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.;
RT "Complete genomic sequence of nitrogen-fixing symbiotic bacterium
RT Bradyrhizobium japonicum USDA110.";
RL DNA Res. 9:189-197(2002).
CC -!- FUNCTION: NAD-binding protein involved in the addition of a
CC carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of
CC certain tRNAs, forming tRNA-cmnm(5)s(2)U34. {ECO:0000255|HAMAP-
CC Rule:MF_00129}.
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00129};
CC -!- SUBUNIT: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00129}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00129}.
CC -!- SIMILARITY: Belongs to the MnmG family. {ECO:0000255|HAMAP-
CC Rule:MF_00129}.
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DR EMBL; BA000040; BAC45898.1; -; Genomic_DNA.
DR RefSeq; NP_767273.1; NC_004463.1.
DR RefSeq; WP_011083460.1; NZ_CP011360.1.
DR AlphaFoldDB; Q89WP5; -.
DR SMR; Q89WP5; -.
DR STRING; 224911.27348882; -.
DR EnsemblBacteria; BAC45898; BAC45898; BAC45898.
DR GeneID; 64020495; -.
DR KEGG; bja:bll0633; -.
DR PATRIC; fig|224911.44.peg.9173; -.
DR eggNOG; COG0445; Bacteria.
DR HOGENOM; CLU_007831_2_2_5; -.
DR InParanoid; Q89WP5; -.
DR OMA; FRPGYAI; -.
DR PhylomeDB; Q89WP5; -.
DR Proteomes; UP000002526; Chromosome.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0050660; F:flavin adenine dinucleotide binding; IBA:GO_Central.
DR GO; GO:0030488; P:tRNA methylation; IBA:GO_Central.
DR GO; GO:0002098; P:tRNA wobble uridine modification; IBA:GO_Central.
DR Gene3D; 1.10.150.570; -; 1.
DR Gene3D; 3.50.50.60; -; 2.
DR HAMAP; MF_00129; MnmG_GidA; 1.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR004416; MnmG.
DR InterPro; IPR002218; MnmG-rel.
DR InterPro; IPR020595; MnmG-rel_CS.
DR InterPro; IPR026904; MnmG_C.
DR InterPro; IPR044920; MnmG_C_subdom.
DR InterPro; IPR040131; MnmG_N.
DR PANTHER; PTHR11806; PTHR11806; 1.
DR PANTHER; PTHR11806:SF0; PTHR11806:SF0; 1.
DR Pfam; PF01134; GIDA; 1.
DR Pfam; PF13932; GIDA_C; 1.
DR SUPFAM; SSF51905; SSF51905; 1.
DR TIGRFAMs; TIGR00136; gidA; 1.
DR PROSITE; PS01280; GIDA_1; 1.
DR PROSITE; PS01281; GIDA_2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; FAD; Flavoprotein; NAD; Reference proteome; tRNA processing.
FT CHAIN 1..626
FT /note="tRNA uridine 5-carboxymethylaminomethyl modification
FT enzyme MnmG"
FT /id="PRO_0000117068"
FT BINDING 14..19
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00129"
FT BINDING 273..287
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00129"
SQ SEQUENCE 626 AA; 67534 MW; 79EE73DFFF5918C7 CRC64;
MRPERESFDV IVIGGGHAGC EAAAASARMG AATALVTHRF STVGAMSCNP AIGGLGKGHL
VREVDALDGL MGRVGDAGGI QFRVLNRRKG PAVRGPRAQA DRKLYAAAMQ AAIRETEGLS
VIEGEADELI VVEGRVTGLR LADGREFGAG SIVVTTGTFL RGLIHLGEKN WPAGRVGEAP
AMGLSSSFER AGFTLGRLKT GTPPRLDGTT IDWSAVEMQP GDEPPEPFSV MTDRITTPQI
QCGITRTTAA THEVIRANVH RSPMYSGQIK SSGPRYCPSI EDKIVRFGDR DGHQIFLEPE
GLDDSTVYPN GISTSLPEEV QLAILASIPG LERVKMVRPG YAIEYDHIDP RELDPTLQTK
RLRGLFLAGQ INGTTGYEEA AGQGIVAGLN AALAASGAAL TVFDRADGYL GVMIDDLVTR
GISEPYRMFT SRAEYRLTLR ADNADQRLTE KGIALGCVRS ARTLHHRTKM EALNAARTLS
KSLTITPNEA IKHGLSLNRD GQRRSAFELM AYPDIGWSQV RAIWLELSAI DPVIATHLEI
DAKYDVYLER QSADVEAFRR DEGLVLSEVD YQLVPGLSNE VRAKLEKARP FTVGQAGRID
GMTPAALGIL AAYLRREARK TSKAIA