MNMG_DECAR
ID MNMG_DECAR Reviewed; 628 AA.
AC Q478A2;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2005, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129};
DE AltName: Full=Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129};
GN Name=mnmG {ECO:0000255|HAMAP-Rule:MF_00129};
GN Synonyms=gidA {ECO:0000255|HAMAP-Rule:MF_00129};
GN OrderedLocusNames=Daro_4103;
OS Dechloromonas aromatica (strain RCB).
OC Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Azonexaceae;
OC Dechloromonas.
OX NCBI_TaxID=159087;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RCB;
RX PubMed=19650930; DOI=10.1186/1471-2164-10-351;
RA Salinero K.K., Keller K., Feil W.S., Feil H., Trong S., Di Bartolo G.,
RA Lapidus A.;
RT "Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB:
RT indications of a surprisingly complex life-style and cryptic anaerobic
RT pathways for aromatic degradation.";
RL BMC Genomics 10:351-351(2009).
CC -!- FUNCTION: NAD-binding protein involved in the addition of a
CC carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of
CC certain tRNAs, forming tRNA-cmnm(5)s(2)U34. {ECO:0000255|HAMAP-
CC Rule:MF_00129}.
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00129};
CC -!- SUBUNIT: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00129}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00129}.
CC -!- SIMILARITY: Belongs to the MnmG family. {ECO:0000255|HAMAP-
CC Rule:MF_00129}.
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DR EMBL; CP000089; AAZ48829.1; -; Genomic_DNA.
DR RefSeq; WP_011289823.1; NC_007298.1.
DR AlphaFoldDB; Q478A2; -.
DR SMR; Q478A2; -.
DR STRING; 159087.Daro_4103; -.
DR EnsemblBacteria; AAZ48829; AAZ48829; Daro_4103.
DR KEGG; dar:Daro_4103; -.
DR eggNOG; COG0445; Bacteria.
DR HOGENOM; CLU_007831_2_2_4; -.
DR OMA; FRPGYAI; -.
DR OrthoDB; 146811at2; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0050660; F:flavin adenine dinucleotide binding; IEA:UniProtKB-UniRule.
DR GO; GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
DR Gene3D; 1.10.150.570; -; 1.
DR Gene3D; 3.50.50.60; -; 2.
DR HAMAP; MF_00129; MnmG_GidA; 1.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR004416; MnmG.
DR InterPro; IPR002218; MnmG-rel.
DR InterPro; IPR020595; MnmG-rel_CS.
DR InterPro; IPR026904; MnmG_C.
DR InterPro; IPR044920; MnmG_C_subdom.
DR InterPro; IPR040131; MnmG_N.
DR PANTHER; PTHR11806; PTHR11806; 1.
DR PANTHER; PTHR11806:SF0; PTHR11806:SF0; 1.
DR Pfam; PF01134; GIDA; 1.
DR Pfam; PF13932; GIDA_C; 1.
DR SUPFAM; SSF51905; SSF51905; 1.
DR TIGRFAMs; TIGR00136; gidA; 1.
DR PROSITE; PS01280; GIDA_1; 1.
DR PROSITE; PS01281; GIDA_2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; FAD; Flavoprotein; NAD; tRNA processing.
FT CHAIN 1..628
FT /note="tRNA uridine 5-carboxymethylaminomethyl modification
FT enzyme MnmG"
FT /id="PRO_1000016589"
FT BINDING 13..18
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00129"
FT BINDING 273..287
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00129"
SQ SEQUENCE 628 AA; 68781 MW; 37F9AA4FB99EA782 CRC64;
MLYPTRFDVI VVGGGHAGTE AALAAARAGA NTLLLTHNLD TLGAMSCNPS IGGIGKGHLV
REVDALGGAM AAATDEAGIQ FRILNASKGP AVRATRAQAD RVLYKQAIRT RLENQPNLTI
FAEACDDLIV EGDKVCGAVT QLGIRFMAEA VVLTAGTFLN GKIHVGLENY TGGRMGDPPS
VSLASRLKEL KLPQGRLKTG TPPRLDGKTI DFSVMEEQHS DDPLPVFSFL GNAAQHPKQL
PCWITETNER THDIIRSGLD RSPMYTGVIE GVGPRYCPSI EDKIHRFADK NQHNVFLEPE
GLTTHEIYPN GVSTSLPFDI QLALVRSIRG MENCHILRPG YAIEYDFYDP RGLKDTLETK
AIHGLFFAGQ INGTTGYEEA AAQGLLAGIN AVRYVRGQSG WCPKRNEAYL GVLVDDLITR
GVSDPYRMFT SRAEYRLSLR EDNADLRLTE QGRELGLVDD VRWTAFCQKR DAIAAEQERL
KSTWVNPKIT PADDCIRVLG KAIDHEYNLF ELLRRPEVTY TSLLTLPGAG EAQTDPLVVE
QLEISAKYQG YIDRQAEEVA KSSSYENTVL PSELDYSSVA GLSNEVRQKL AQHKPQTIGQ
ASRIQGITPA AISLLLIHLK RHNLSQAA