MNMG_SYNJA
ID MNMG_SYNJA Reviewed; 643 AA.
AC Q2JXG8;
DT 22-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 07-MAR-2006, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129};
DE AltName: Full=Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129};
GN Name=mnmG {ECO:0000255|HAMAP-Rule:MF_00129};
GN Synonyms=gidA {ECO:0000255|HAMAP-Rule:MF_00129};
GN OrderedLocusNames=CYA_0296;
OS Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone
OS A-Prime).
OC Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus;
OC unclassified Synechococcus.
OX NCBI_TaxID=321327;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JA-3-3Ab;
RX PubMed=18059494; DOI=10.1038/ismej.2007.46;
RA Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N.,
RA Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.;
RT "Population level functional diversity in a microbial community revealed by
RT comparative genomic and metagenomic analyses.";
RL ISME J. 1:703-713(2007).
CC -!- FUNCTION: NAD-binding protein involved in the addition of a
CC carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of
CC certain tRNAs, forming tRNA-cmnm(5)s(2)U34. {ECO:0000255|HAMAP-
CC Rule:MF_00129}.
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00129};
CC -!- SUBUNIT: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00129}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00129}.
CC -!- SIMILARITY: Belongs to the MnmG family. {ECO:0000255|HAMAP-
CC Rule:MF_00129}.
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DR EMBL; CP000239; ABC98518.1; -; Genomic_DNA.
DR RefSeq; WP_011429207.1; NC_007775.1.
DR AlphaFoldDB; Q2JXG8; -.
DR SMR; Q2JXG8; -.
DR STRING; 321327.CYA_0296; -.
DR PRIDE; Q2JXG8; -.
DR EnsemblBacteria; ABC98518; ABC98518; CYA_0296.
DR KEGG; cya:CYA_0296; -.
DR eggNOG; COG0445; Bacteria.
DR HOGENOM; CLU_007831_2_2_3; -.
DR OMA; FRPGYAI; -.
DR OrthoDB; 146811at2; -.
DR Proteomes; UP000008818; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0050660; F:flavin adenine dinucleotide binding; IEA:UniProtKB-UniRule.
DR GO; GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
DR Gene3D; 1.10.150.570; -; 1.
DR Gene3D; 3.50.50.60; -; 2.
DR HAMAP; MF_00129; MnmG_GidA; 1.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR004416; MnmG.
DR InterPro; IPR002218; MnmG-rel.
DR InterPro; IPR020595; MnmG-rel_CS.
DR InterPro; IPR026904; MnmG_C.
DR InterPro; IPR044920; MnmG_C_subdom.
DR InterPro; IPR040131; MnmG_N.
DR PANTHER; PTHR11806; PTHR11806; 1.
DR PANTHER; PTHR11806:SF0; PTHR11806:SF0; 1.
DR Pfam; PF01134; GIDA; 1.
DR Pfam; PF13932; GIDA_C; 1.
DR SUPFAM; SSF51905; SSF51905; 1.
DR TIGRFAMs; TIGR00136; gidA; 1.
DR PROSITE; PS01280; GIDA_1; 1.
DR PROSITE; PS01281; GIDA_2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; FAD; Flavoprotein; NAD; tRNA processing.
FT CHAIN 1..643
FT /note="tRNA uridine 5-carboxymethylaminomethyl modification
FT enzyme MnmG"
FT /id="PRO_0000345346"
FT BINDING 21..26
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00129"
FT BINDING 282..296
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00129"
SQ SEQUENCE 643 AA; 71574 MW; B3DB728DB1F92F74 CRC64;
MLKVGRDNVD FLDHYDVIVV GGGHAGCEAA LAAARLGCNT LMLTLNLDKI AWQPCNPAVG
GPAKSQLVHE IDALGGEMGK VTDRTYLQKR VLNRSRGPAV WALRAQTDKR EYARVMRSVV
ENQPNLSIRE GTVTDLVLGR NDEVVGVVTH FGSVFGCGAV ILTTGTFLGG RIWIGRHWQP
AGRAGEFAVE GLTDTLRQLG FETGRLKTGT PARVDRRSVD FSVMERQPGD PDLRWFSFDP
EVWVPREQMD CYLTRTTPET HRIIRENLHE TPVYGGWVEA KGPRYCPSIE DKIVRFADKE
SHQIFIEPEG RDLPELYIQG FSTGMPEKIQ IQMLRSLPGL ERCVMLRPAY AVEYDYLPAT
QLYPTLMTKK VQGLFCAGQI NGTTGYEEAA AQGLIAGINA ARLVQGKPLV TLPRESSYIG
TLIDDLCTKE LREPYRMLTS RSEYRLILRA DNADQRLTPL GREWGLIDDR RWALFQAKQA
RIAAEIERLE TQRVKAHDPA GIHLSQLTGQ GIKGSATLAE LLRRNPIHYA DLLELGLGNE
ELDPFEQEAA EIAVKYSGYI QRQQAQIEQV SKQYHRPLPP DLDYHSIPTL SKESREKLAA
VRPLTVGQAA RIGGVNPADI NALLIYLEVR QRQKTAAAAP VGA