MNMG_SYNJB
ID MNMG_SYNJB Reviewed; 643 AA.
AC Q2JI26;
DT 22-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 07-MAR-2006, sequence version 1.
DT 03-AUG-2022, entry version 84.
DE RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129};
DE AltName: Full=Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129};
GN Name=mnmG {ECO:0000255|HAMAP-Rule:MF_00129};
GN Synonyms=gidA {ECO:0000255|HAMAP-Rule:MF_00129};
GN OrderedLocusNames=CYB_2823;
OS Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium
OS Yellowstone B-Prime).
OC Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus;
OC unclassified Synechococcus.
OX NCBI_TaxID=321332;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JA-2-3B'a(2-13);
RX PubMed=18059494; DOI=10.1038/ismej.2007.46;
RA Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N.,
RA Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.;
RT "Population level functional diversity in a microbial community revealed by
RT comparative genomic and metagenomic analyses.";
RL ISME J. 1:703-713(2007).
CC -!- FUNCTION: NAD-binding protein involved in the addition of a
CC carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of
CC certain tRNAs, forming tRNA-cmnm(5)s(2)U34. {ECO:0000255|HAMAP-
CC Rule:MF_00129}.
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00129};
CC -!- SUBUNIT: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00129}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00129}.
CC -!- SIMILARITY: Belongs to the MnmG family. {ECO:0000255|HAMAP-
CC Rule:MF_00129}.
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DR EMBL; CP000240; ABD03745.1; -; Genomic_DNA.
DR RefSeq; WP_011434362.1; NC_007776.1.
DR AlphaFoldDB; Q2JI26; -.
DR SMR; Q2JI26; -.
DR STRING; 321332.CYB_2823; -.
DR KEGG; cyb:CYB_2823; -.
DR eggNOG; COG0445; Bacteria.
DR HOGENOM; CLU_007831_2_2_3; -.
DR OMA; FRPGYAI; -.
DR OrthoDB; 146811at2; -.
DR Proteomes; UP000001938; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0050660; F:flavin adenine dinucleotide binding; IEA:UniProtKB-UniRule.
DR GO; GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
DR Gene3D; 1.10.150.570; -; 1.
DR Gene3D; 3.50.50.60; -; 2.
DR HAMAP; MF_00129; MnmG_GidA; 1.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR004416; MnmG.
DR InterPro; IPR002218; MnmG-rel.
DR InterPro; IPR020595; MnmG-rel_CS.
DR InterPro; IPR026904; MnmG_C.
DR InterPro; IPR044920; MnmG_C_subdom.
DR InterPro; IPR040131; MnmG_N.
DR PANTHER; PTHR11806; PTHR11806; 1.
DR PANTHER; PTHR11806:SF0; PTHR11806:SF0; 1.
DR Pfam; PF01134; GIDA; 1.
DR Pfam; PF13932; GIDA_C; 1.
DR SUPFAM; SSF51905; SSF51905; 1.
DR TIGRFAMs; TIGR00136; gidA; 1.
DR PROSITE; PS01280; GIDA_1; 1.
DR PROSITE; PS01281; GIDA_2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; FAD; Flavoprotein; NAD; Reference proteome; tRNA processing.
FT CHAIN 1..643
FT /note="tRNA uridine 5-carboxymethylaminomethyl modification
FT enzyme MnmG"
FT /id="PRO_0000345345"
FT BINDING 21..26
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00129"
FT BINDING 282..296
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00129"
SQ SEQUENCE 643 AA; 71885 MW; 4D3C7BF39A585F2A CRC64;
MLRVGRDSID FLDHYDVVVV GGGHSGCEAA LAAARLGCNT LMLTLNLDKI AWQPCNPAVG
GPAKSQLVHE IDALGGEMGK VTDRTYLQKR VLNRSRGPAV WALRAQTDKR EYARVMRSVV
ENQPNLTIRE GTVTDLVLGR NDEVVGVVTH FGTIFGCRAV ILTTGTFLGG RIWIGRHWQA
AGRAGEFAVE GLTDTLRQLG FETGRLKTGT PARVDRRSVD FSVMERQPGD PDVRWFSFDP
EVWVPREQMD CYLTRTTPET HRIIRENLHE TPVYGGWVEA KGPRYCPSIE DKIVRFADKE
SHQIFIEPEG RDLPELYIQG FSTGMPEKIQ IQMLRSLPGL ERCVMLRPAY AVEYDYLPAT
QLYPTLMTKK VQGLFCAGQI NGTTGYEEAA AQGLIAGINA ARLVQGKPLV TLPRESSYIG
TLIDDLCTKE LREPYRMLTS RSEYRLILRS DNADQRLTPL GREWGLIDDR RWALFQAKQA
RIAAEIERLE TQRVKAHDLA GIQLSQLTGQ GIKGSATLAE ILRRNQIHYS DLLELGLGDA
ELDPFEQEAA EIAVKYSGYI QRQQSQIEQV SKQYHRPLPP DLDYHSIPTL SKESRDKLSA
VRPLTVGQAA RIGGVNPADI NALLIYLEVR QRQRAADPVC SSL