ID   MNMG_VARPS              Reviewed;         652 AA.
AC   C5CW10;
DT   22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT   28-JUL-2009, sequence version 1.
DT   03-AUG-2022, entry version 67.
DE   RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129};
DE   AltName: Full=Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129};
GN   Name=mnmG {ECO:0000255|HAMAP-Rule:MF_00129};
GN   Synonyms=gidA {ECO:0000255|HAMAP-Rule:MF_00129};
GN   OrderedLocusNames=Vapar_0045;
OS   Variovorax paradoxus (strain S110).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=543728;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S110;
RX   PubMed=21183664; DOI=10.1128/jb.00925-10;
RA   Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G.,
RA   O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C.,
RA   Ovchinnikova G., Goodwin L., Han C.;
RT   "Complete genome sequence of the metabolically versatile plant growth-
RT   promoting endophyte, Variovorax paradoxus S110.";
RL   J. Bacteriol. 193:1183-1190(2011).
CC   -!- FUNCTION: NAD-binding protein involved in the addition of a
CC       carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of
CC       certain tRNAs, forming tRNA-cmnm(5)s(2)U34. {ECO:0000255|HAMAP-
CC       Rule:MF_00129}.
CC   -!- COFACTOR:
CC       Name=FAD; Xref=ChEBI:CHEBI:57692;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_00129};
CC   -!- SUBUNIT: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.
CC       {ECO:0000255|HAMAP-Rule:MF_00129}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00129}.
CC   -!- SIMILARITY: Belongs to the MnmG family. {ECO:0000255|HAMAP-
CC       Rule:MF_00129}.
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DR   EMBL; CP001635; ACS16708.1; -; Genomic_DNA.
DR   RefSeq; WP_012745210.1; NC_012791.1.
DR   AlphaFoldDB; C5CW10; -.
DR   SMR; C5CW10; -.
DR   STRING; 543728.Vapar_0045; -.
DR   EnsemblBacteria; ACS16708; ACS16708; Vapar_0045.
DR   GeneID; 45054381; -.
DR   KEGG; vap:Vapar_0045; -.
DR   eggNOG; COG0445; Bacteria.
DR   HOGENOM; CLU_007831_2_2_4; -.
DR   OMA; FRPGYAI; -.
DR   OrthoDB; 146811at2; -.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0050660; F:flavin adenine dinucleotide binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
DR   Gene3D; 1.10.150.570; -; 1.
DR   Gene3D; 3.50.50.60; -; 2.
DR   HAMAP; MF_00129; MnmG_GidA; 1.
DR   InterPro; IPR036188; FAD/NAD-bd_sf.
DR   InterPro; IPR004416; MnmG.
DR   InterPro; IPR002218; MnmG-rel.
DR   InterPro; IPR020595; MnmG-rel_CS.
DR   InterPro; IPR026904; MnmG_C.
DR   InterPro; IPR044920; MnmG_C_subdom.
DR   InterPro; IPR040131; MnmG_N.
DR   PANTHER; PTHR11806; PTHR11806; 1.
DR   PANTHER; PTHR11806:SF0; PTHR11806:SF0; 1.
DR   Pfam; PF01134; GIDA; 1.
DR   Pfam; PF13932; GIDA_C; 1.
DR   SUPFAM; SSF51905; SSF51905; 1.
DR   TIGRFAMs; TIGR00136; gidA; 1.
DR   PROSITE; PS01280; GIDA_1; 1.
DR   PROSITE; PS01281; GIDA_2; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; FAD; Flavoprotein; NAD; tRNA processing.
FT   CHAIN           1..652
FT                   /note="tRNA uridine 5-carboxymethylaminomethyl modification
FT                   enzyme MnmG"
FT                   /id="PRO_1000203171"
FT   BINDING         13..18
FT                   /ligand="FAD"
FT                   /ligand_id="ChEBI:CHEBI:57692"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00129"
FT   BINDING         279..293
FT                   /ligand="NAD(+)"
FT                   /ligand_id="ChEBI:CHEBI:57540"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00129"
SQ   SEQUENCE   652 AA;  71818 MW;  BDA926E187495608 CRC64;
     MLYPEEFDVI VVGGGHAGTE AALAAARMGA KTLLLSHNIE TLGQMSCNPS IGGIGKGHLV
     KEVDALGGAM AIATDEAGIQ FRILNSSKGP AVRATRAQAD RVLYKAAIRH RLENQPNLSL
     FQQAVDDLMV EGDRVVGAVT QVGIAFRART VVLTAGTFLD GRIHVGLDNY QAGRAGDPPA
     VSLSARLKEL KLPQGRLKTG TPPRLDGRSI DFSKCTEQAG DGMPGGAGPM PVFSFMGRAD
     MHPQQMPCWI THTNARTHDI IRSGFDRSPM FTGKIDGVGP RYCPSVEDKI NRFADKESHQ
     IFLEPEGLTT NEYYPNGIST SLPFDIQYQL VRSMPGLENA HILRPGYAIE YDYFDPRELK
     SSFETRSIKG LFFAGQINGT TGYEEAAAQG LFAGINAALQ CRGEEAWLPR RDEAYLGVLV
     DDLITKGVTE PYRMFTSRAE FRLQLREDNA DMRLTEAGRK LGLVDDARWD AFSRKRDTVS
     RETERLKSIW VNPRNLPAAE SERVLGKAIE HEYNLADLLR RPDVNYETLM SLDGGKYSAG
     SPLSEIEIEQ IEISAKYSGY IERQHDEVER AAHFENLRLP ADFDYSQVKA LSFEVRQKLD
     KHRPETLGLA SRISGVTPAA ISLLMIHLRK GGHKAFNRDA ATEAAAESQP AQ