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MPRA_MYCTU
ID   MPRA_MYCTU              Reviewed;         230 AA.
AC   P9WGM9; L0T5H1; O53894; Q7D914;
DT   16-APR-2014, integrated into UniProtKB/Swiss-Prot.
DT   16-APR-2014, sequence version 1.
DT   03-AUG-2022, entry version 42.
DE   RecName: Full=Response regulator MprA;
DE   AltName: Full=Mycobacterial persistence regulator A;
GN   Name=mprA; OrderedLocusNames=Rv0981;
OS   Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv).
OC   Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC   Mycobacterium; Mycobacterium tuberculosis complex.
OX   NCBI_TaxID=83332;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=9634230; DOI=10.1038/31159;
RA   Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.M., Harris D.E.,
RA   Gordon S.V., Eiglmeier K., Gas S., Barry C.E. III, Tekaia F., Badcock K.,
RA   Basham D., Brown D., Chillingworth T., Connor R., Davies R.M., Devlin K.,
RA   Feltwell T., Gentles S., Hamlin N., Holroyd S., Hornsby T., Jagels K.,
RA   Krogh A., McLean J., Moule S., Murphy L.D., Oliver S., Osborne J.,
RA   Quail M.A., Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton S.,
RA   Squares S., Squares R., Sulston J.E., Taylor K., Whitehead S.,
RA   Barrell B.G.;
RT   "Deciphering the biology of Mycobacterium tuberculosis from the complete
RT   genome sequence.";
RL   Nature 393:537-544(1998).
RN   [2]
RP   INDUCTION SIGE-DEPENDENT.
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=11489128; DOI=10.1046/j.1365-2958.2001.02525.x;
RA   Manganelli R., Voskuil M.I., Schoolnik G.K., Smith I.;
RT   "The Mycobacterium tuberculosis ECF sigma factor sigmaE: role in global
RT   gene expression and survival in macrophages.";
RL   Mol. Microbiol. 41:423-437(2001).
RN   [3]
RP   FUNCTION DURING STAGES OF PERSISTENT INFECTION, AND INDUCTION.
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=11675502; DOI=10.1073/pnas.221272198;
RA   Zahrt T.C., Deretic V.;
RT   "Mycobacterium tuberculosis signal transduction system required for
RT   persistent infections.";
RL   Proc. Natl. Acad. Sci. U.S.A. 98:12706-12711(2001).
RN   [4]
RP   FUNCTION AS A TRANSCRIPTIONAL REGULATOR, PHOSPHORYLATION AT ASP-48 BY MPRB,
RP   AND MUTAGENESIS OF ASP-48 AND ASP-53.
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=14638785; DOI=10.1128/iai.71.12.6962-6970.2003;
RA   Zahrt T.C., Wozniak C., Jones D., Trevett A.;
RT   "Functional analysis of the Mycobacterium tuberculosis MprAB two-component
RT   signal transduction system.";
RL   Infect. Immun. 71:6962-6970(2003).
RN   [5]
RP   FUNCTION AS A TRANSCRIPTIONAL REGULATOR, SUBUNIT, AUTOREGULATION,
RP   DNA-BINDING, AND MUTAGENESIS OF ASP-48.
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=15601704; DOI=10.1128/jb.187.1.202-212.2005;
RA   He H., Zahrt T.C.;
RT   "Identification and characterization of a regulatory sequence recognized by
RT   Mycobacterium tuberculosis persistence regulator MprA.";
RL   J. Bacteriol. 187:202-212(2005).
RN   [6]
RP   FUNCTION IN STRESS RESPONSE, INDUCTION, DNA-BINDING, AND MUTAGENESIS OF
RP   ASP-48.
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=16513743; DOI=10.1128/jb.188.6.2134-2143.2006;
RA   He H., Hovey R., Kane J., Singh V., Zahrt T.C.;
RT   "MprAB is a stress-responsive two-component system that directly regulates
RT   expression of sigma factors SigB and SigE in Mycobacterium tuberculosis.";
RL   J. Bacteriol. 188:2134-2143(2006).
RN   [7]
RP   FUNCTION DURING NORMAL GROWTH CONDITION AND UNDER STRESS.
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=17379732; DOI=10.1099/mic.0.29281-0;
RA   Pang X., Vu P., Byrd T.F., Ghanny S., Soteropoulos P., Mukamolova G.V.,
RA   Wu S., Samten B., Howard S.T.;
RT   "Evidence for complex interactions of stress-associated regulons in an
RT   mprAB deletion mutant of Mycobacterium tuberculosis.";
RL   Microbiology 153:1229-1242(2007).
RN   [8]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   STRAIN=ATCC 25618 / H37Rv;
RX   PubMed=21969609; DOI=10.1074/mcp.m111.011627;
RA   Kelkar D.S., Kumar D., Kumar P., Balakrishnan L., Muthusamy B., Yadav A.K.,
RA   Shrivastava P., Marimuthu A., Anand S., Sundaram H., Kingsbury R.,
RA   Harsha H.C., Nair B., Prasad T.S., Chauhan D.S., Katoch K., Katoch V.M.,
RA   Kumar P., Chaerkady R., Ramachandran S., Dash D., Pandey A.;
RT   "Proteogenomic analysis of Mycobacterium tuberculosis by high resolution
RT   mass spectrometry.";
RL   Mol. Cell. Proteomics 10:M111.011627-M111.011627(2011).
CC   -!- FUNCTION: Member of the two-component regulatory system MprB/MprA which
CC       contributes to maintaining a balance among several systems involved in
CC       stress resistance and is required for establishment and maintenance of
CC       persistent infection in the host. Functions as a transcriptional
CC       regulator that recognizes a 19-bp nucleotide motif comprizing two
CC       loosely conserved 8-bp direct DNA-binding motif repeats separated by a
CC       3-bp spacer region. MprB/MprA is involved in regulation of numerous
CC       stress-responsive genes, including up-regulation of two sigma factors,
CC       sigE and sigB as well as pepD and mprA, and repression of multiple
CC       genes from regulons associated with hypoxia, starvation and iron
CC       metabolism. The majority of genes regulated by MprB/MprA under a
CC       particular stress condition are different from those induced during
CC       normal growth, but several genes are commonly regulated under more than
CC       one condition. {ECO:0000269|PubMed:11675502,
CC       ECO:0000269|PubMed:14638785, ECO:0000269|PubMed:15601704,
CC       ECO:0000269|PubMed:16513743, ECO:0000269|PubMed:17379732}.
CC   -!- SUBUNIT: Monomer. Interaction with each conserved 8-bp repeat requires
CC       tandem binding by two protein monomers (Probable).
CC       {ECO:0000305|PubMed:15601704}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC   -!- INDUCTION: Autoregulated. Differentially up-regulated under different
CC       stress conditions, such as low concentrations of detergents and
CC       alkaline pH. Induced by low concentrations of sodium dodecyl sulfate
CC       (SDS) in a SigE-dependent manner. In strain ATCC 25618 / H37Rv,
CC       repressed during growth in macrophages. {ECO:0000269|PubMed:11489128,
CC       ECO:0000269|PubMed:11675502, ECO:0000269|PubMed:16513743}.
CC   -!- PTM: Phosphorylated and dephosphorylated by MprB.
CC       {ECO:0000269|PubMed:14638785}.
CC   -!- MISCELLANEOUS: Phosphorylation is not required for binding to DNA in
CC       vitro. However, phosphorylation enhances DNA binding and is required
CC       for activity in vivo.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=CCP43731.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR   EMBL; AL123456; CCP43731.1; ALT_INIT; Genomic_DNA.
DR   PIR; A70821; A70821.
DR   RefSeq; NP_215496.2; NC_000962.3.
DR   AlphaFoldDB; P9WGM9; -.
DR   SMR; P9WGM9; -.
DR   STRING; 83332.Rv0981; -.
DR   PaxDb; P9WGM9; -.
DR   DNASU; 885038; -.
DR   GeneID; 885038; -.
DR   KEGG; mtu:Rv0981; -.
DR   TubercuList; Rv0981; -.
DR   eggNOG; COG0745; Bacteria.
DR   OMA; NYEFFGD; -.
DR   PhylomeDB; P9WGM9; -.
DR   Proteomes; UP000001584; Chromosome.
DR   GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR   GO; GO:0009274; C:peptidoglycan-based cell wall; HDA:MTBBASE.
DR   GO; GO:0005886; C:plasma membrane; HDA:MTBBASE.
DR   GO; GO:0032993; C:protein-DNA complex; IBA:GO_Central.
DR   GO; GO:0003677; F:DNA binding; IDA:MTBBASE.
DR   GO; GO:0001216; F:DNA-binding transcription activator activity; IBA:GO_Central.
DR   GO; GO:0000156; F:phosphorelay response regulator activity; IBA:GO_Central.
DR   GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR   GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IDA:MTBBASE.
DR   GO; GO:0000160; P:phosphorelay signal transduction system; IDA:MTBBASE.
DR   GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:MTBBASE.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IDA:MTBBASE.
DR   GO; GO:0010446; P:response to alkaline pH; IEP:UniProtKB.
DR   CDD; cd00383; trans_reg_C; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR011006; CheY-like_superfamily.
DR   InterPro; IPR001867; OmpR/PhoB-type_DNA-bd.
DR   InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR   InterPro; IPR039420; WalR-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR48111; PTHR48111; 1.
DR   Pfam; PF00072; Response_reg; 1.
DR   Pfam; PF00486; Trans_reg_C; 1.
DR   SMART; SM00448; REC; 1.
DR   SMART; SM00862; Trans_reg_C; 1.
DR   SUPFAM; SSF52172; SSF52172; 1.
DR   PROSITE; PS51755; OMPR_PHOB; 1.
DR   PROSITE; PS50110; RESPONSE_REGULATORY; 1.
PE   1: Evidence at protein level;
KW   Activator; Cytoplasm; DNA-binding; Phosphoprotein; Reference proteome;
KW   Repressor; Stress response; Transcription; Transcription regulation;
KW   Two-component regulatory system; Virulence.
FT   CHAIN           1..230
FT                   /note="Response regulator MprA"
FT                   /id="PRO_0000308427"
FT   DOMAIN          4..118
FT                   /note="Response regulatory"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00169"
FT   DNA_BIND        129..227
FT                   /note="OmpR/PhoB-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01091"
FT   MOD_RES         48
FT                   /note="4-aspartylphosphate"
FT                   /evidence="ECO:0000305|PubMed:14638785"
FT   MUTAGEN         48
FT                   /note="D->A: Abolishes phosphorylation. No loss of DNA-
FT                   binding activity in vitro."
FT                   /evidence="ECO:0000269|PubMed:14638785,
FT                   ECO:0000269|PubMed:15601704, ECO:0000269|PubMed:16513743"
FT   MUTAGEN         53
FT                   /note="D->A: No loss of phosphorylation."
FT                   /evidence="ECO:0000269|PubMed:14638785"
SQ   SEQUENCE   230 AA;  25894 MW;  7A159FED949BE001 CRC64;
     MSVRILVVDD DRAVRESLRR SLSFNGYSVE LAHDGVEALD MIASDRPDAL VLDVMMPRLD
     GLEVCRQLRG TGDDLPILVL TARDSVSERV AGLDAGADDY LPKPFALEEL LARMRALLRR
     TKPEDAAESM AMRFSDLTLD PVTREVNRGQ RRISLTRTEF ALLEMLIANP RRVLTRSRIL
     EEVWGFDFPT SGNALEVYVG YLRRKTEADG EPRLIHTVRG VGYVLRETPP
 
 
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