MRD1_CANAL
ID MRD1_CANAL Reviewed; 841 AA.
AC Q5AJS6; A0A1D8PJC4; Q5AJE7;
DT 22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 10-MAY-2017, sequence version 2.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Multiple RNA-binding domain-containing protein 1;
GN Name=MRD1; OrderedLocusNames=CAALFM_C302020WA;
GN ORFNames=CaO19.1646, CaO19.9215;
OS Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX NCBI_TaxID=237561;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=15123810; DOI=10.1073/pnas.0401648101;
RA Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B.,
RA Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W.,
RA Scherer S.;
RT "The diploid genome sequence of Candida albicans.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
RA van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
RA Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
RA Chibana H., Nantel A., Magee P.T.;
RT "Assembly of the Candida albicans genome into sixteen supercontigs aligned
RT on the eight chromosomes.";
RL Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
RA Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
RT "Assembly of a phased diploid Candida albicans genome facilitates allele-
RT specific measurements and provides a simple model for repeat and indel
RT structure.";
RL Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
CC -!- FUNCTION: Involved in pre-rRNA processing. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the RRM MRD1 family. {ECO:0000305}.
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DR EMBL; CP017625; AOW28240.1; -; Genomic_DNA.
DR RefSeq; XP_721723.2; XM_716630.2.
DR AlphaFoldDB; Q5AJS6; -.
DR SMR; Q5AJS6; -.
DR STRING; 237561.Q5AJS6; -.
DR PRIDE; Q5AJS6; -.
DR GeneID; 3636592; -.
DR KEGG; cal:CAALFM_C302020WA; -.
DR CGD; CAL0000192627; orf19.9215.
DR VEuPathDB; FungiDB:C3_02020W_A; -.
DR eggNOG; KOG0110; Eukaryota.
DR HOGENOM; CLU_008479_0_0_1; -.
DR InParanoid; Q5AJS6; -.
DR OrthoDB; 1428854at2759; -.
DR PRO; PR:Q5AJS6; -.
DR Proteomes; UP000000559; Chromosome 3.
DR GO; GO:0016607; C:nuclear speck; IBA:GO_Central.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR CDD; cd12568; RRM3_MRD1; 1.
DR Gene3D; 3.30.70.330; -; 5.
DR InterPro; IPR034482; Mrd1_RRM3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR003954; RRM_dom_euk.
DR Pfam; PF00076; RRM_1; 5.
DR SMART; SM00360; RRM; 5.
DR SMART; SM00361; RRM_1; 2.
DR SUPFAM; SSF54928; SSF54928; 3.
DR PROSITE; PS50102; RRM; 5.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Repeat; Ribonucleoprotein; RNA-binding;
KW rRNA processing.
FT CHAIN 1..841
FT /note="Multiple RNA-binding domain-containing protein 1"
FT /id="PRO_0000081638"
FT DOMAIN 2..79
FT /note="RRM 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 310..388
FT /note="RRM 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 493..565
FT /note="RRM 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 617..700
FT /note="RRM 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 717..794
FT /note="RRM 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 194..249
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 213..227
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 841 AA; 94935 MW; C5633671A83B0C99 CRC64;
MSRLIVKGLP KYYTEEKLRE FFSKQGDVTD VKLMKKRNGE SRKFAFIGYK SADAAERAVK
YFNKSFIDTA RIEVEFAKTF SDPTVPLSFK EKRKREEQKL KDEQERLLEQ ELRAQAKKQK
TKSTSEIDDE IASNPKLREY MEVMKPSHQV KSWANDTIAD GSGGPSVQDL ENALNGNNES
PVDKSNIEVV NTVEDASDDE YNDFKELSNK HGENEDEEEE EEMMSLGDLP TNEENKDKNE
SGENLAANEN ISDLEWLKSR STRIKENGEV PEIVPEVKEV NEVTEATQQS DNEPEMTPEE
QIAHKIEETG RLFIRNISYE ASEEDFRSLF SQYGALEEVH IAIDTRTGKS KGFLYVQFLK
KEDATRAYRS LDKQIFQGRL LHILPADKKK DHRLDEFDLK NLPLKKQREL KKKAQAAKTQ
FSWNSLYMNS DAVLESVASK LGVTKSQLID PENSSSAVKQ ALAEAHVIGD VRKYFEDRGV
DLTSFDKKER DDKIILVKNF PFGTTIDEIG ELFSAYGQLK RMLMPPAGTI AIIEFRDAPS
ARAAFSKLAY KRFKSSILYL EKGPKDLFTR EPTTNEVATI PEQQQNEHAV EAKISANEIL
GESKEDDEIE SVQGPTVAVF VKNLNFATTV QALSDLFKPL PGFVVATVKT KPDPKNSGKT
LSMGFGFVEF RTKEQANVAI STLDGHVLDG HKLQLKLSHK QGTGTSASSI KKSGKSSKII
IKNLPFEATR KDLLELFGAF GQLKSVRVPK KFDQSARGFA FVEFNLMKEA ETAMSQLEGV
HLLGRRLVMQ YAEQDAENAE VEIERMTKKV KKQVATQNLA AARLAGKGKI ELEEKDEEDF
D