MRL7L_ORYSJ
ID MRL7L_ORYSJ Reviewed; 329 AA.
AC Q0DI48; Q688K6; Q6AT71;
DT 12-APR-2017, integrated into UniProtKB/Swiss-Prot.
DT 17-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic {ECO:0000305};
DE Short=OsMRL7-L {ECO:0000305};
DE Flags: Precursor;
GN Name=MRL7L {ECO:0000305};
GN OrderedLocusNames=Os05g0417200 {ECO:0000312|EMBL:BAF17475.1},
GN LOC_Os05g34470 {ECO:0000305};
GN ORFNames=OsJ_18562 {ECO:0000312|EMBL:EEE63743.1},
GN OSJNBa0084P24.17 {ECO:0000312|EMBL:AAT77387.1},
GN P0579A05.3 {ECO:0000312|EMBL:AAU10783.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Plays an essential role in early steps of chloroplast
CC development. Involved in the regulation of plastid gene expression.
CC Required for the proper function of the plastid transcriptional
CC machinery and protein accumulation in thylakoid membranes. May function
CC as molecular chaperone to ensure proper organization of the nucleoids
CC in chloroplasts. {ECO:0000250|UniProtKB:Q9SKB6}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma
CC {ECO:0000250|UniProtKB:Q9SKB6}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAT77387.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAU10783.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAG92767.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; AC134933; AAU10783.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC137617; AAT77387.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008211; BAF17475.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS94046.1; -; Genomic_DNA.
DR EMBL; CM000142; EEE63743.1; -; Genomic_DNA.
DR EMBL; AK071955; BAG92767.1; ALT_FRAME; mRNA.
DR RefSeq; XP_015640074.1; XM_015784588.1.
DR AlphaFoldDB; Q0DI48; -.
DR SMR; Q0DI48; -.
DR STRING; 4530.OS05T0417200-01; -.
DR PaxDb; Q0DI48; -.
DR PRIDE; Q0DI48; -.
DR EnsemblPlants; Os05t0417200-01; Os05t0417200-01; Os05g0417200.
DR GeneID; 4338807; -.
DR Gramene; Os05t0417200-01; Os05t0417200-01; Os05g0417200.
DR KEGG; osa:4338807; -.
DR eggNOG; ENOG502QPQP; Eukaryota.
DR HOGENOM; CLU_072426_0_0_1; -.
DR InParanoid; Q0DI48; -.
DR OMA; HNRYRRP; -.
DR OrthoDB; 1314217at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000007752; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR GO; GO:0009570; C:chloroplast stroma; IBA:GO_Central.
DR GO; GO:0009658; P:chloroplast organization; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR InterPro; IPR044701; MRL7/MRL7L.
DR PANTHER; PTHR34669; PTHR34669; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Plastid; Reference proteome; Transit peptide.
FT TRANSIT 1..46
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 47..329
FT /note="Thioredoxin-like fold domain-containing protein
FT MRL7L homolog, chloroplastic"
FT /evidence="ECO:0000255"
FT /id="PRO_0000439383"
FT REGION 58..91
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 329 AA; 37211 MW; F2D96FF882A270E6 CRC64;
MALQSCCSSS ASVPATCSAL CLAEATRAAS LFVRPRAAAR RLVLARCARG REGGESKAVQ
LVLGGRARDD GSESESSDDE DDDEPMQMTD EQRRTLRRKI REMMDRVPET AEITDPAERK
AKMLELLTKY QLVVEEEDPN WPEDDEDGHG FSLGQFFDKI TIKAEKKNDD DEEDDAKGNQ
SDKEIVWEDD NYIKPIRDVK TMDWDDTVFT DFGPLIVLVH NRYKRPQDNE NARDQLVKAI
EMFWEYNLPS PRCVAVDACA EPDLVKALNV SGFPEVLFTN AGKIVHRDKV VRSAEEWTRM
MAFFYYKAAR PPCLSEADGQ GQEKVPLMS
