MS5L1_ARATH
ID MS5L1_ARATH Reviewed; 469 AA.
AC Q9FKV5;
DT 29-OCT-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 133.
DE RecName: Full=Protein POLLENLESS 3-LIKE 1 {ECO:0000303|Ref.4};
GN OrderedLocusNames=At5g44330 {ECO:0000312|Araport:AT5G44330};
GN ORFNames=K9L2.11 {ECO:0000312|EMBL:BAB10118.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9679202; DOI=10.1093/dnares/5.2.131;
RA Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence
RT features of the regions of 1,381,565 bp covered by twenty one physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:131-145(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [4]
RP TISSUE SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RX DOI=10.1007/s004970050158;
RA Sanders P.M., Bui A.Q., Weterings K., McIntire K.N., Hsu Y.-C., Lee P.Y.,
RA Truong M.T., Beals T.B., Goldberg R.B.;
RT "Anther developmental defects in Arabidopsis thaliana male-sterile
RT mutants.";
RL Sex. Plant Reprod. 11:297-322(1999).
CC -!- FUNCTION: Probably involved in the regulation of cell division.
CC {ECO:0000250|UniProtKB:Q9SUC3}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9SUC3}.
CC -!- TISSUE SPECIFICITY: Expressed in floral and vegetative organs. Also
CC barely detectable in leaves and stems. {ECO:0000269|Ref.4}.
CC -!- SIMILARITY: Belongs to the MS5 protein family. {ECO:0000305|Ref.4}.
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DR EMBL; AB011475; BAB10118.1; -; Genomic_DNA.
DR EMBL; CP002688; AED95097.1; -; Genomic_DNA.
DR EMBL; DQ056706; AAY78852.1; -; mRNA.
DR RefSeq; NP_199246.1; NM_123800.1.
DR AlphaFoldDB; Q9FKV5; -.
DR SMR; Q9FKV5; -.
DR STRING; 3702.AT5G44330.1; -.
DR PaxDb; Q9FKV5; -.
DR PRIDE; Q9FKV5; -.
DR EnsemblPlants; AT5G44330.1; AT5G44330.1; AT5G44330.
DR GeneID; 834458; -.
DR Gramene; AT5G44330.1; AT5G44330.1; AT5G44330.
DR KEGG; ath:AT5G44330; -.
DR Araport; AT5G44330; -.
DR TAIR; locus:2158750; AT5G44330.
DR eggNOG; ENOG502QQBN; Eukaryota.
DR HOGENOM; CLU_013792_0_0_1; -.
DR InParanoid; Q9FKV5; -.
DR OMA; ITQPREC; -.
DR OrthoDB; 579132at2759; -.
DR PhylomeDB; Q9FKV5; -.
DR PRO; PR:Q9FKV5; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FKV5; baseline and differential.
DR Genevisible; Q9FKV5; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR044961; MS5/SDI1.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR013105; TPR_2.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR36326; PTHR36326; 1.
DR Pfam; PF07719; TPR_2; 1.
DR SMART; SM00028; TPR; 1.
DR SUPFAM; SSF48452; SSF48452; 1.
DR PROSITE; PS50005; TPR; 1.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 2: Evidence at transcript level;
KW Cell cycle; Cell division; Coiled coil; Nucleus; Reference proteome;
KW Repeat; TPR repeat.
FT CHAIN 1..469
FT /note="Protein POLLENLESS 3-LIKE 1"
FT /id="PRO_0000430654"
FT REPEAT 88..121
FT /note="TPR 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REPEAT 124..157
FT /note="TPR 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REPEAT 184..217
FT /note="TPR 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 314..339
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 139..191
FT /evidence="ECO:0000255"
FT COMPBIAS 314..337
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 469 AA; 53281 MW; 5E2665D2BD4E18B3 CRC64;
MRRRESRGAK GGGFLTPPPS WHTTRRVYIA MPISERKRSP LIENQESFRV RTGDSPYVRA
KHAQLVSKDP NRAISLFWAA INAGDRVDSA LKDMVVVLKQ LNRFDEGIEA IKSFRYLCPF
ESQDSIDNLL LELYMKSGRI TEVAELLEHK LRTLEQDKHY GGRIKIAKRS HEEQNNKTIE
QEKARILGNL AWVHLQLHNY GIAEQYYRNA LSLEPDNNKL CNLAICLIRM ERTHEAKSLL
EDVKQSLGNQ WKNEPFCKSF ERATEMLAER EQATVADKPE DLLTSSFSDN FSSRCSGGMK
GKKALAGTST ELGNIHKTNS HASSESVEQN SPGLTTQPRE CKWVDEEVDQ SKWDATIGAS
RKLRFWTVGP VRSLRFGNDY QKNLKSVGTA ASTTNDELHQ FISSDADCMT SKARKLCPEL
IKDKEDNEKE SERIASESSS AYAKITDIGQ RKVLHIDQRK VRHIGQRSV